| Computer system and method for customizing context information sent with document fragments across a computer network SJ DeRose, J Apple, GT Nicol, MJ Braca US Patent 6,167,409, 2000 | 127 | 2000 |
| The Phrase dharmaparyāyo hastagato in Mahāyāna Buddhist Literature: Rethinking the Cult of the Book in Middle Period Indian Mahāyāna Buddhism JB Apple Journal of the American Oriental Society 134 (1), 25-50, 2014 | 22 | 2014 |
| Atiśa's Open Basket of Jewels: A Middle Way Vision in Late Phase Indian Vajrayāna JB Apple The Indian International Journal of Buddhist Studies 11, 117-198, 2010 | 14 | 2010 |
| Stairway to Nirvāna: A Study of the Twenty Saṃghas Based on the Works of Tsong kha pa JB Apple SUNY Press, 2009 | 13 | 2009 |
| An Early Tibetan Commentary on Atiśa’s Satyadvayāvatāra: Diplomatic Edition with Introduction and Notes JB Apple Journal of Indian Philosophy, 2013 | 12 | 2013 |
| An Early Tibetan Commentary on Atiśa’s Satyadvayāvatāra JB Apple Journal of Indian Philosophy 41 (3), 263-329, 2013 | 12 | 2013 |
| Twenty Varieties of the Samgha: A Typology of Noble Beings (Ārya) in Indo-Tibetan Scholasticism (Part I) J Apple Journal of Indian philosophy 31, 503-592, 2003 | 12 | 2003 |
| Pure Lands in Asian texts and contexts: an anthology R Overbey, A Andreeva, RF Rhodes, J Apple, TE Dreitlein, AP Proffitt, ... University of Hawaii Press, 2019 | 11 | 2019 |
| Fragments and Phylogeny of the Tibetan Version of the Mañjuśrīvihārasūtra: A Case Study in the Genealogy of Tibetan Kanjurs JB Apple Annual Report of the International Research Institute for Advanced …, 2014 | 11 | 2014 |
| Eschatology and world order in Buddhist formations JB Apple Religious Studies and Theology 29 (1), 109, 2010 | 11 | 2010 |
| Atisa Dipamkara: Illuminator of the Awakened Mind JB Apple Shambhala Publications, 2019 | 9 | 2019 |
| Atiśa's Teachings on Mahāmudrā JB Apple The Indian International Journal of Buddhist Studies= IIJBS 18, 1-42, 2017 | 9 | 2017 |
| " Wordplay": emergent ideology through semantic elucidation: a rhetorical technique in Mahayana Buddhist formations JB Apple 東洋哲学研究所紀要= Bulletin of the Institute of Oriental Philosophy, 80-68, 2009 | 8 | 2009 |
| Stairway to Nirvana: A Study of the Twenty Samghas Based on the Works of Tsong Kha Pa JB Apple State University of New York Press, 2008 | 8 | 2008 |
| Jewels of the Middle Way: The Madhyamaka Legacy of Atisa and His Early Tibetan Followers JB Apple Simon and Schuster, 2019 | 7 | 2019 |
| A Re-evaluation of Pelliot tibétain 1257: An Early Tibet-an-Chinese Glossary from Dunhuang1 JB Apple, SA Apple Revue d’études tibétaines, 68, 2017 | 7 | 2017 |
| PERFECTIONS (SIX and TEN) of Bodhisattvas in Buddhist literature JB Apple Oxford Research Encyclopedia of Religion, 2016 | 7 | 2016 |
| Khu lo tsā ba’s Treatise: Distinguishing the Svātantrika/* Prāsaṅgika difference in early twelfth century Tibet JB Apple Journal of Indian Philosophy 46 (5), 935-981, 2018 | 6 | 2018 |
| Redaction and Rhetoric in Mahāyāna Sūtras: The Case of the Jayamatiparipṛcchāsūtra JB Apple Indo-Iranian Journal 58 (1), 1-25, 2015 | 6 | 2015 |
| The Single Vehicle (ekaya na) in the Avaivartikacakrasutra and Lotus Sutra. JB Apple 東洋哲学研究所紀要= Bulletin of the Institute of Oriental Philosophy, 268-238, 2014 | 6 | 2014 |
