| shinyheatmap: Ultra fast low memory heatmap web interface for big data genomics B Khomtchouk, JR Hennessy, C Wahlestedt PLoS One 12 (5), e0176334, 2017 | 114 | 2017 |
| Polynomial Regression As an Alternative to Neural Nets X Cheng, B Khomtchouk, N Matloff, P Mohanty arXiv, 1-23, 2018 | 85 | 2018 |
| HeatmapGenerator: high performance RNAseq and microarray visualization software suite to examine differential gene expression levels using an R and C++ hybrid computational … BB Khomtchouk, DJ Van Booven, C Wahlestedt Source Code for Biology and Medicine 9 (1), 1-6, 2014 | 67 | 2014 |
| Dependence-induced increased of alcohol self-administration and compulsive drinking mediated by the histone methyltransferase PRDM2 E Barbier, A Johnstone, B Khomtchouk, J Tapocik, C Pitcairn, F Rehman, ... Molecular Psychiatry, 1-13, 2016 | 57 | 2016 |
| Enhanced single-cell transcriptomics workflow reveals coronary artery disease cellular cross-talk and candidate drug targets WF Ma, C Hodonsky, A Turner, D Wong, Y Song, JV Mosquera, AV Ligay, ... Atherosclerosis 340, 12-22, 2022 | 36* | 2022 |
| Dysregulation of the histone demethylase KDM6B in alcohol dependence is associated with epigenetic regulation of inflammatory signaling pathways A Johnstone, N Andrade, E Barbier, BB Khomtchouk, C Rienas, K Lowe, ... Addiction Biology, e12816, 2019 | 34 | 2019 |
| Ischemic preconditioning confers epigenetic repression of Mtor and induction of autophagy through G9a-dependent H3K9 di-methylation O Gidlof, AL Johnstone, K Bader, BB Khomtchouk, JJ O'Reilly, ... Journal of the American Heart Association 5 (12), 1-27, 2016 | 33 | 2016 |
| Cardioinformatics: the nexus of bioinformatics and precision cardiology B Khomtchouk, DT Tran, KA Vand, M Might, O Gozani, TL Assimes Briefings in Bioinformatics 21 (6), 2031-2051, 2020 | 17 | 2020 |
| MicroScope: ChIP-seq and RNA-seq software analysis suite for gene expression heatmaps BB Khomtchouk, JR Hennessy, C Wahlestedt BMC Bioinformatics 17 (390), 1-9, 2016 | 14 | 2016 |
| Treatment with a neutrophil elastase inhibitor and ofloxacin reduces P. aeruginosa burden in a mouse model of chronic suppurative otitis media KM Khomtchouk, LI Joseph, BB Khomtchouk, A Kouhi, S Massa, A Xia, ... npj Biofilms Microbiomes 7 (31), 2021 | 11 | 2021 |
| HeartBioPortal: an internet-of-omics for human cardiovascular disease data B Khomtchouk, KA Vand, WC Koehler, DT Tran, K Middlebrook, ... Circulation: Genomic and Precision Medicine 12 (4), e002426, 2019 | 11 | 2019 |
| NERO: A Biomedical Named-entity (Recognition) Ontology with a Large, Annotated Corpus Reveals Meaningful Associations Through Text Embedding K Wang, R Stevens, H Alachram, Y Li, L Soldatova, R King, S Ananiadou, ... npj Systems Biology and Applications 7 (38), 2021 | 10 | 2021 |
| How the strengths of Lisp-family languages facilitate building complex and flexible bioinformatics applications BB Khomtchouk, E Weitz, PD Karp, C Wahlestedt Briefings in bioinformatics 19 (3), 537-543, 2018 | 10 | 2018 |
| Codon usage bias levels predict taxonomic identity and genetic composition B Khomtchouk bioRxiv, 2020 | 9 | 2020 |
| Targeting the cytoskeleton and extracellular matrix in cardiovascular disease drug discovery BB Khomtchouk, YS Lee, ML Khan, P Sun, D Mero, MH Davidson Expert Opinion on Drug Discovery 17 (5), 443-60, 2022 | 6 | 2022 |
| HeartBioPortal2.0: new developments and updates for genetic ancestry and cardiometabolic quantitative traits in diverse human populations B Khomtchouk, CS Nelson, KA Vand, S Palmisano, RL Grossman Database, 2020 | 6 | 2020 |
| Gaussian-Distributed Codon Frequencies of Genomes B Khomtchouk, W Nonner G3: Genes, Genomes, Genetics 9 (5), 1449-1456, 2019 | 6 | 2019 |
| Targeting long non-coding RNA NUDT6 enhances smooth muscle cell survival and limits vascular disease progression H Winter, G Winski, A Busch, E Chernogubova, F Fasolo, Z Wu, ... Molecular Therapy 31 (6), P1775-90, 2023 | 5 | 2023 |
| Optimized functional annotation of ChIP-seq data B Khomtchouk, WC Koehler, D Van Booven, C Wahlestedt F1000Research 8 (612), 2019 | 5* | 2019 |
| Polynomial regression as an alternative to neural nets,(2018) X Cheng, B Khomtchouk, N Matloff, P Mohanty Preprint, 1806 | 5 | 1806 |
Claes WahlestedtLeonard M. Miller Professor, University of Miami Miller School of MedicineVerified email at med.miami.edu
