Follow
Luis Pedro Coelho
Luis Pedro Coelho
Centre for Microbiome Research, Queensland University of Technology
Verified email at qut.edu.au - Homepage
Title
Cited by
Cited by
Year
Structure and function of the global ocean microbiome
S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ...
Science 348 (6237), 2015
23132015
Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper
J Huerta-Cepas, K Forslund, LP Coelho, D Szklarczyk, LJ Jensen, ...
Mol Biol Evol, msx148, 2017
21162017
Structure and function of the global topsoil microbiome
M Bahram, F Hildebrand, SK Forslund, JL Anderson, NA Soudzilovskaia, ...
Nature 560 (7717), 233-237, 2018
15352018
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ...
Nature medicine 25 (4), 679-689, 2019
8282019
A community effort to assess and improve drug sensitivity prediction algorithms
JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ...
Nature biotechnology 32 (12), 1202-1212, 2014
7512014
Towards standards for human fecal sample processing in metagenomic studies.
PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ...
Nature biotechnology, 2017
7132017
Plankton networks driving carbon export in the oligotrophic ocean
L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ...
Nature, 2016
6922016
Recovery of gut microbiota of healthy adults following antibiotic exposure
A Palleja, KH Mikkelsen, SK Forslund, A Kashani, KH Allin, T Nielsen, ...
Nature microbiology 3 (11), 1255-1265, 2018
5682018
Functional implications of microbial and viral gut metagenome changes in early stage L-DOPA-naïve Parkinson’s disease patients
JR Bedarf, F Hildebrand, LP Coelho, S Sunagawa, M Bahram, F Goeser, ...
Genome medicine 9, 1-13, 2017
5332017
Metagenomic species profiling using universal phylogenetic marker genes
S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ...
Nature methods 10 (12), 1196-1199, 2013
4952013
Extensive transmission of microbes along the gastrointestinal tract
TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ...
eLife 8, e42693, 2019
3552019
Microbial abundance, activity and population genomic profiling with mOTUs2
A Milanese, DR Mende, L Paoli, G Salazar, HJ Ruscheweyh, M Cuenca, ...
Nature Communications 10 (1), 1014, 2019
3402019
Statin therapy is associated with lower prevalence of gut microbiota dysbiosis
S Vieira-Silva, G Falony, E Belda, T Nielsen, J Aron-Wisnewsky, ...
Nature 581 (7808), 310-315, 2020
3172020
A community computational challenge to predict the activity of pairs of compounds
M Bansal, J Yang, C Karan, MP Menden, JC Costello, H Tang, G Xiao, ...
Nature biotechnology 32 (12), 1213-1222, 2014
3142014
Host-cell sensors for Plasmodium activate innate immunity against liver-stage infection
P Liehl, V Zuzarte-Luís, J Chan, T Zillinger, F Baptista, D Carapau, ...
Nature medicine 20 (1), 47-53, 2014
3122014
Selective maternal seeding and environment shape the human gut microbiome
K Korpela, PI Costea, LP Coelho, S Kandels-Lewis, G Willemsen, ...
Genome Research, gr. 233940.117, 2018
3012018
Global trends in marine plankton diversity across kingdoms of life
FM Ibarbalz, N Henry, MC Brandão, S Martini, G Busseni, H Byrne, ...
Cell 179 (5), 1084-1097. e21, 2019
2992019
Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
G Salazar, L Paoli, A Alberti, J Huerta-Cepas, HJ Ruscheweyh, M Cuenca, ...
Cell 179 (5), 1068-1083. e21, 2019
2732019
Mahotas: Open source software for scriptable computer vision
LP Coelho
Journal of Open Research Software 1, e3, 2013
2692013
Nuclear segmentation in microscope cell images: a hand-segmented dataset and comparison of algorithms
LP Coelho, A Shariff, RF Murphy
Biomedical Imaging: From Nano to Macro, 2009. ISBI'09. IEEE International …, 2009
2552009
The system can't perform the operation now. Try again later.
Articles 1–20