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Nathan D Olson
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The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
17012022
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
AM Wenger, P Peluso, WJ Rowell, PC Chang, RJ Hall, GT Concepcion, ...
Nature biotechnology 37 (10), 1155-1162, 2019
12522019
A robust benchmark for detection of germline large deletions and insertions
JM Zook, NF Hansen, ND Olson, L Chapman, JC Mullikin, C Xiao, ...
Nature biotechnology 38 (11), 1347-1355, 2020
315*2020
An open resource for accurately benchmarking small variant and reference calls
JM Zook, J McDaniel, ND Olson, J Wagner, H Parikh, H Heaton, SA Irvine, ...
Nature biotechnology 37 (5), 561-566, 2019
2972019
A draft human pangenome reference
WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ...
Nature 617 (7960), 312-324, 2023
2752023
Nitrogen fixation and nitrogen transformations in marine symbioses
CL Fiore, JK Jarett, ND Olson, MP Lesser
Trends in microbiology 18 (10), 455-463, 2010
2672010
Performing skin microbiome research: a method to the madness
HH Kong, B Andersson, T Clavel, JE Common, SA Jackson, ND Olson, ...
Journal of Investigative Dermatology 137 (3), 561-568, 2017
2232017
Best practices for evaluating single nucleotide variant calling methods for microbial genomics
ND Olson, SP Lund, RE Colman, JT Foster, JW Sahl, JM Schupp, P Keim, ...
Frontiers in genetics 6, 235, 2015
2082015
A complete reference genome improves analysis of human genetic variation
Science 376 (6588), 2022
184*2022
Diazotrophic bacteria associated with Hawaiian Montipora corals: diversity and abundance in correlation with symbiotic dinoflagellates
ND Olson, TD Ainsworth, RD Gates, M Takabayashi
Journal of Experimental Marine Biology and Ecology 371 (2), 140-146, 2009
1742009
DNA extract characterization process for microbial detection methods development and validation
ND Olson, JB Morrow
BMC research notes 5, 1-14, 2012
1532012
Metagenomic assembly through the lens of validation: recent advances in assessing and improving the quality of genomes assembled from metagenomes
ND Olson, TJ Treangen, CM Hill, V Cepeda-Espinoza, J Ghurye, S Koren, ...
Briefings in bioinformatics 20 (4), 1140-1150, 2019
1452019
Curated variation benchmarks for challenging medically relevant autosomal genes
J Wagner, ND Olson, L Harris, J McDaniel, H Cheng, A Fungtammasan, ...
Nature biotechnology 40 (5), 672-680, 2022
1132022
Antibiotic concentrations decrease during wastewater treatment but persist at low levels in reclaimed water
P Kulkarni, ND Olson, GA Raspanti, RE Rosenberg Goldstein, SG Gibbs, ...
International journal of environmental research and public health 14 (6), 668, 2017
1132017
PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
ND Olson, J Wagner, J McDaniel, SH Stephens, ST Westreich, ...
Cell genomics 2 (5), 2022
1112022
Benchmarking challenging small variants with linked and long reads
J Wagner, ND Olson, L Harris, Z Khan, J Farek, M Mahmoud, A Stankovic, ...
Cell Genomics 2 (5), 2022
1092022
Semi-automated assembly of high-quality diploid human reference genomes
ED Jarvis, G Formenti, A Rhie, A Guarracino, C Yang, J Wood, A Tracey, ...
Nature 611 (7936), 519-531, 2022
962022
The complete sequence of a human Y chromosome
A Rhie, S Nurk, M Cechova, SJ Hoyt, DJ Taylor, N Altemose, PW Hook, ...
Nature 621 (7978), 344-354, 2023
902023
Conventional wastewater treatment and reuse site practices modify bacterial community structure but do not eliminate some opportunistic pathogens in reclaimed water
P Kulkarni, ND Olson, JN Paulson, M Pop, C Maddox, E Claye, ...
Science of the Total Environment 639, 1126-1137, 2018
562018
Assembly and annotation of an Ashkenazi human reference genome
A Shumate, AV Zimin, RM Sherman, D Puiu, JM Wagner, ND Olson, ...
Genome biology 21, 1-18, 2020
532020
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Articles 1–20