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Andrew P. Rothstein
Andrew P. Rothstein
Senior Computational Biologist, Concentric by Ginkgo Bioworks
Verified email at ginkgobioworks.com
Title
Cited by
Cited by
Year
Comment on “Amphibian fungal panzootic causes catastrophic and ongoing loss of biodiversity”
MR Lambert, MC Womack, AQ Byrne, O Hernández-Gómez, CF Noss, ...
Science 367 (6484), eaay1838, 2020
462020
Unlocking the story in the swab: A new genotyping assay for the amphibian chytrid fungus Batrachochytrium dendrobatidis
AQ Byrne, AP Rothstein, TJ Poorten, J Erens, ML Settles, EB Rosenblum
Molecular ecology resources 17 (6), 1283-1292, 2017
412017
Invasive vegetation affects amphibian skin microbiota and body condition
O Hernández-Gómez, AQ Byrne, AR Gunderson, TS Jenkinson, CF Noss, ...
PeerJ 8, e8549, 2020
132020
Divergent regional evolutionary histories of a devastating global amphibian pathogen
AP Rothstein, AQ Byrne, RA Knapp, CJ Briggs, J Voyles, ...
Proceedings of the Royal Society B 288 (1953), 20210782, 2021
122021
Notes from the field: aircraft wastewater surveillance for early detection of SARS-CoV-2 variants—John F. Kennedy International Airport, New York City, August–September 2022
RC Morfino
MMWR. Morbidity and Mortality Weekly Report 72, 2023
112023
Survival by genotype: patterns at Mc1r are not black and white at the White Sands ecotone
S Des Roches, R Sollmann, K Calhoun, AP Rothstein, EB Rosenblum
Molecular Ecology, 2016
8*2016
Non-invasive genetic tracking of harbor seals (Phoca vitulina)
AP Rothstein
Western Washington University, 2015
82015
wisepair: a computer program for individual matching in genetic tracking studies
AP Rothstein, R McLaughlin, A Acevedo‐Gutiérrez, D Schwarz
Molecular ecology resources 17 (2), 267-277, 2017
72017
Stepping into the past to conserve the future: archived skin swabs from extant and extirpated populations inform genetic management of an endangered amphibian
AP Rothstein, RA Knapp, GS Bradburd, DM Boiano, CJ Briggs, ...
Molecular Ecology 29 (14), 2598-2611, 2020
52020
Bayesian phylogenetics on globally emerging SARS-CoV-2 variant BA. 2.86 suggest global distribution and rapid evolution
AP Rothstein, X Qiu, K Robison, S Collins, G Muir, B Lu, A Plocik, B Simen, ...
bioRxiv, 2023.09. 08.556912, 2023
42023
Revisiting conservation units for the endangered mountain yellow-legged frog species complex (Rana muscosa, Rana sierrae) using multiple genomic methods
AQ Byrne, AP Rothstein, LL Smith, H Kania, RA Knapp, DM Boiano, ...
Conservation Genetics, 1-16, 2023
32023
Evolutionary rescue and reintroduction of resistant frogs allows recovery in the presence of a lethal fungal disease
RA Knapp, MQ Wilber, AQ Byrne, MB Joseph, TC Smith, AP Rothstein, ...
22023
Population genomics of diarrheagenic Escherichia coli uncovers high connectivity between urban and rural communities in Ecuador
AP Rothstein, KJ Jesser, DJ Feistel, KT Konstantinidis, G Trueba, K Levy
Infection, Genetics and Evolution 113, 105476, 2023
12023
Correction: Revisiting conservation units for the endangered mountain yellow-legged frog species complex (Rana muscosa, Rana sierrae) using multiple genomic methods
AQ Byrne, AP Rothstein, LL Smith, H Kania, RA Knapp, DM Boiano, ...
Conservation Genetics, 1-2, 2024
2024
Early Identification of the SARS-CoV-2 Omicron BA. 2.86 Variant by the Traveler-Based Genomic Surveillance Program—Dulles International Airport, August 2023.
SM Bart, AP Rothstein, CW Philipson, TC Smith, BB Simen, A Tamin, ...
MMWR: Morbidity & Mortality Weekly Report 72 (43), 2023
2023
Reintroduction of resistant frogs facilitates landscape-scale recovery in the presence of a lethal fungal disease
RA Knapp, MQ Wilber, AQ Byrne, MB Joseph, TC Smith, AP Rothstein, ...
bioRxiv, 2023.05. 22.541534, 2023
2023
1525. The Impact of Traveler-Based Genomic Surveillance on SARS-CoV-2 Variant Detection in Arriving International Air Travelers–United States, November 29, 2021-April 24, 2022
GD Appiah, TC Smith, R Wegrzyn, RC Morfino, S Guagliardo, S Milford, ...
Open Forum Infectious Diseases 9 (Suppl 2), 2022
2022
The Impact of Traveler-Based Genomic Surveillance on SARS-CoV-2 Variant Detection in Arriving International Air Travelers-United States, November 29, 2021-April 24, 2022
GD Appiah, TC Smith, R Wegrzyn, RC Morfino, S Guagliardo, S Milford, ...
Open Forum Infectious Diseases, S52-S53, 2022
2022
Managing disease-related amphibian declines using genomics
AP Rothstein
University of California, Berkeley, 2020
2020
Population genetics of endangered mountain yellow-legged frogs (Rana muscosa and Rana sierrae) based on non-invasive swab sampling in Sequoia and Kings …
AP Rothstein, RA Knapp, D Boiano, EB Rosenblum
2018 ESA Annual Meeting (August 5--10), 2018
2018
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