| CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse O Friard, A Re, D Taverna, M De Bortoli, D Corá BMC bioinformatics 11, 1-10, 2010 | 149 | 2010 |
| RNA–protein interactions: an overview A Re, T Joshi, E Kulberkyte, Q Morris, CT Workman RNA sequence, structure, and function: Computational and bioinformatic …, 2014 | 145 | 2014 |
| Widespread uncoupling between transcriptome and translatome variations after a stimulus in mammalian cells T Tebaldi, A Re, G Viero, I Pegoretti, A Passerini, E Blanzieri, A Quattrone BMC genomics 13, 1-15, 2012 | 143 | 2012 |
| Genome-wide survey of microRNA–transcription factor feed-forward regulatory circuits in human A Re, D Corá, D Taverna, M Caselle Molecular BioSystems 5 (8), 854-867, 2009 | 135 | 2009 |
| Software for the Integration of Multiomics Experiments in Bioconductor. R Marcel, S Lucas, R Angela, A Rimsha, B Azfar, R Carmen, C Tiffany, ... Cancer Res 77 (21), e39-e42, 2017 | 100 | 2017 |
| MicroRNA-mediated regulatory circuits: outlook and perspectives A Re, M Caselle, F Bussolino Physical biology 14 (4), 045001, 2017 | 84 | 2017 |
| AURA 2: Empowering discovery of post-transcriptional networks E Dassi, A Re, S Leo, T Tebaldi, L Pasini, D Peroni, A Quattrone Translation 2 (1), e27738, 2014 | 82 | 2014 |
| Public data and open source tools for multi-assay genomic investigation of disease L Kannan, M Ramos, A Re, N El-Hachem, Z Safikhani, DMA Gendoo, ... Briefings in bioinformatics 17 (4), 603-615, 2016 | 61 | 2016 |
| Inhibition of mitochondrial translation suppresses glioblastoma stem cell growth D Sighel, M Notarangelo, S Aibara, A Re, G Ricci, M Guida, A Soldano, ... Cell reports 35 (4), 2021 | 42 | 2021 |
| Analysis of the light intensity dependence of the growth of Synechocystis and of the light distribution in a photobioreactor energized by 635 nm light A Cordara, A Re, C Pagliano, P Van Alphen, R Pirone, G Saracco, ... PeerJ 6, e5256, 2018 | 37 | 2018 |
| Thylakoid proteome modulation in pea plants grown at different irradiances: quantitative proteomic profiling in a non‐model organism aided by transcriptomic data integration P Albanese, M Manfredi, A Re, E Marengo, G Saracco, C Pagliano The Plant Journal 96 (4), 786-800, 2018 | 32 | 2018 |
| AURA: Atlas of UTR regulatory activity E Dassi, A Malossini, A Re, T Mazza, T Tebaldi, L Caputi, A Quattrone Bioinformatics 28 (1), 142-144, 2012 | 30 | 2012 |
| Novel insights in dimethyl carbonate-based extraction of polyhydroxybutyrate (PHB) B Mongili, A Abdel Azim, S Fraterrigo Garofalo, E Batuecas, A Re, ... Biotechnology for biofuels 14, 1-16, 2021 | 28 | 2021 |
| Detecting modules in biological networks by edge weight clustering and entropy significance P Lecca, A Re Frontiers in genetics 6, 145247, 2015 | 27 | 2015 |
| TrkA is amplified in malignant melanoma patients and induces an anti-proliferative response in cell lines L Pasini, A Re, T Tebaldi, G Ricci, S Boi, V Adami, M Barbareschi, ... BMC cancer 15, 1-18, 2015 | 26 | 2015 |
| Correlated fragile site expression allows the identification of candidate fragile genes involved in immunity and associated with carcinogenesis A Re, D Cora, AM Puliti, M Caselle, I Sbrana BMC bioinformatics 7, 1-18, 2006 | 26 | 2006 |
| Segmental chromosome aberrations converge on overexpression of mitotic spindle regulatory genes in high‐risk neuroblastoma WF Ooi, A Re, V Sidarovich, V Canella, N Arseni, V Adami, ... Genes, Chromosomes and Cancer 51 (6), 545-556, 2012 | 20 | 2012 |
| BiP/GRP78 mediates ERAD targeting of proteins produced by membrane-bound ribosomes stalled at the STOP-codon F Cesaratto, L Sasset, MP Myers, A Re, G Petris, OR Burrone Journal of molecular biology 431 (2), 123-141, 2019 | 17 | 2019 |
| Clostridium cellulovorans metabolism of cellulose as studied by comparative proteomic approach G Usai, S Cirrincione, A Re, M Manfredi, A Pagnani, E Pessione, ... Journal of proteomics 216, 103667, 2020 | 16 | 2020 |
| Synthetic gene expression circuits for designing precision tools in oncology A Re Frontiers in Cell and Developmental Biology 5, 77, 2017 | 16 | 2017 |
