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Carlos Vargas-Chavez
Carlos Vargas-Chavez
Institute of Evolutionary Biology (CSIC-UPF)
Verified email at ibe.upf-csic.es
Title
Cited by
Cited by
Year
Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings
I Almudi, J Vizueta, CDR Wyatt, A de Mendoza, F Marlétaz, PN Firbas, ...
Nature communications 11 (1), 2631, 2020
712020
Genome evolution in the primary endosymbiont of whiteflies sheds light on their divergence
D Santos-Garcia, C Vargas-Chavez, A Moya, A Latorre, FJ Silva
Genome biology and evolution 7 (3), 873-888, 2015
562015
Evolutionary analysis of DELLA-associated transcriptional networks
A Briones-Moreno, J Hernández-García, C Vargas-Chávez, ...
Frontiers in Plant Science 8, 253688, 2017
442017
The transposable element-rich genome of the cereal pest Sitophilus oryzae
N Parisot, C Vargas-Chávez, C Goubert, P Baa-Puyoulet, S Balmand, ...
BMC biology 19, 1-28, 2021
392021
Coordination between growth and stress responses by DELLA in the liverwort Marchantia polymorpha
J Hernández-García, R Sun, A Serrano-Mislata, K Inoue, ...
Current Biology 31 (16), 3678-3686. e11, 2021
362021
Transposable elements contribute to the genomic response to insecticides in Drosophila melanogaster
J Salces-Ortiz, C Vargas-Chavez, L Guio, GE Rech, J González
Philosophical Transactions of the Royal Society B 375 (1795), 20190341, 2020
292020
Reconstructing and mining the B cell repertoire with ImmunediveRsity
B Cortina-Ceballos, EE Godoy-Lozano, H Sámano-Sánchez, ...
MAbs 7 (3), 516-524, 2015
292015
Phylogenomics identifies an ancestral burst of gene duplications predating the diversification of Aphidomorpha
I Julca, M Marcet-Houben, F Cruz, C Vargas-Chavez, JS Johnston, ...
Molecular Biology and Evolution 37 (3), 730-756, 2020
242020
The genomic sequence of Exiguobacterium chiriqhucha str. N139 reveals a species that thrives in cold waters and extreme environmental conditions
A Gutiérrez-Preciado, C Vargas-Chávez, M Reyes-Prieto, OF Ordoñez, ...
PeerJ 5, e3162, 2017
212017
Tremblaya phenacola PPER: an evolutionary beta-gammaproteobacterium collage
R Gil, C Vargas-Chavez, S López-Madrigal, D Santos-García, A Latorre, ...
The ISME Journal 12 (1), 124-135, 2018
172018
MATEdb, a data repository of high-quality metazoan transcriptome assemblies to accelerate phylogenomic studies
R Fernández, V Tonzo, C Simón Guerrero, J Lozano-Fernandez, ...
Peer Community Journal 2, 2022
122022
SymbioGenomesDB: a database for the integration and access to knowledge on host–symbiont relationships
M Reyes-Prieto, C Vargas-Chavez, A Latorre, A Moya
Database 2015, bav109, 2015
92015
DELLA functions evolved by rewiring of associated transcriptional networks
A Briones-Moreno, J Hernández-García, C Vargas-Chávez, ...
Nature Plants 9 (4), 535-543, 2023
62023
Transposable element variants and their potential adaptive impact in urban populations of the malaria vector Anopheles coluzzii
C Vargas-Chavez, NML Pendy, SE Nsango, L Aguilera, D Ayala, ...
Genome Research 32 (1), 189-202, 2022
6*2022
An update on the Symbiotic Genomes Database (SymGenDB): a collection of metadata, genomic, genetic and protein sequences, orthologs and metabolic networks of symbiotic organisms
M Reyes-Prieto, C Vargas-Chávez, M Llabrés, P Palmer, A Latorre, ...
Database 2020, baz160, 2020
42020
The genome sequence of the Montseny horsehair worm, Gordionus montsenyensis sp. nov., a key resource to investigate Ecdysozoa evolution
K Eleftheriadi, N Guiglielmoni, J Salces-Ortiz, C Vargas-Chavez, ...
Peer Community Journal 4, 2024
32024
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics
AM Mc Cartney, G Formenti, A Mouton, D De Panis, LS Marins, HG Leitão, ...
bioRxiv, 2023.09. 25.559365, 2023
32023
Inferring horizontal gene transfer with DarkHorse, Phylomizer, and ETE Toolkits
L Delaye, C Vargas, A Latorre, A Moya
Horizontal Gene Transfer: Methods and Protocols, 355-369, 2020
22020
Transposable elements in a cold-tolerant fly species, Drosophila montana: a link to adaptation to the harsh cold environments
MS Tahami, C Vargas-Chavez, N Poikela, M Coronado-Zamora, ...
bioRxiv, 2024.04. 17.589934, 2024
2024
MATEdb2, a collection of high-quality metazoan proteomes across the Animal Tree of Life to speed up phylogenomic studies
GI Martinez-Redondo, C Vargas-Chavez, K Eleftheriadi, ...
bioRxiv, 2024.02. 21.581367, 2024
2024
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