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Crystal Hepp
Crystal Hepp
Associate Professor at Northern Arizona Unversity and the Translational Genomics Research Institute
Verified email at nau.edu
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Cited by
Year
NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats
JW Sahl, D Lemmer, J Travis, JM Schupp, JD Gillece, M Aziz, EM Driebe, ...
Microbial genomics 2 (8), e000074, 2016
2172016
Revisiting the evolution of mouse LINE-1 in the genomic era
A Sookdeo, CM Hepp, MA McClure, S Boissinot
Mobile DNA 4, 1-15, 2013
1622013
Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever
DM Engelthaler, CC Roe, CM Hepp, M Teixeira, EM Driebe, JM Schupp, ...
MBio 7 (2), 10.1128/mbio. 00550-16, 2016
832016
High Leptospira Diversity in Animals and Humans Complicates the Search for Common Reservoirs of Human Disease in Rural Ecuador
V Barragan, J Chiriboga, E Miller, S Olivas, D Birdsell, C Hepp, ...
PLoS neglected tropical diseases 10 (9), e0004990, 2016
762016
A Bacillus anthracis genome sequence from the Sverdlovsk 1979 autopsy specimens
JW Sahl, T Pearson, R Okinaka, JM Schupp, JD Gillece, H Heaton, ...
MBio 7 (5), 10.1128/mbio. 01501-16, 2016
652016
Genotyping of Burkholderia mallei from an Outbreak of Glanders in Bahrain Suggests Multiple Introduction Events
HC Scholz, T Pearson, H Hornstra, M Projahn, R Terzioglu, R Wernery, ...
PLoS neglected tropical diseases 8 (9), e3195, 2014
612014
Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus
EM Driebe, JW Sahl, C Roe, JR Bowers, JM Schupp, JD Gillece, E Kelley, ...
PLoS One 10 (7), e0130955, 2015
572015
The In Silico Genotyper (ISG): an open-source pipeline to rapidly identify and annotate nucleotide variants for comparative genomics applications
JW Sahl, SM Beckstrom-Sternberg, JS Babic-Sternberg, JD Gillece, ...
bioRxiv, 015578, 2015
422015
Whole genome analysis of injectional anthrax identifies two disease clusters spanning more than 13 years
P Keim, R Grunow, R Vipond, G Grass, A Hoffmaster, DN Birdsell, ...
EBioMedicine 2 (11), 1613-1618, 2015
392015
Temporal phylogeography of Yersinia pestis in Madagascar: Insights into the long-term maintenance of plague
AJ Vogler, V Andrianaivoarimanana, S Telfer, CM Hall, JW Sahl, ...
PLoS neglected tropical diseases 11 (9), e0005887, 2017
372017
The Northern Arizona SNP Pipeline (NASP): accurate, flexible, and rapid identification of SNPs in WGS datasets
JW Sahl, D Lemmer, J Travis, JM Schupp, JD Gillece, M Aziz, EM Driebe, ...
bioRxiv, 037267, 2016
302016
Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa
EL Kaufman, NE Stone, GA Scoles, CM Hepp, JD Busch, DM Wagner
Parasites & vectors 11, 1-11, 2018
272018
An early pandemic analysis of SARS-CoV-2 population structure and dynamics in Arizona
JT Ladner, BB Larsen, JR Bowers, CM Hepp, E Bolyen, M Folkerts, ...
MBio 11 (5), 10.1128/mbio. 02107-20, 2020
262020
Health disparities and converging epidemics in jail populations: protocol for a mixed-methods study
RT Trotter II, R Camplain, ER Eaves, VY Fofanov, NO Dmitrieva, CM Hepp, ...
JMIR research protocols 7 (10), e10337, 2018
222018
Dating the Cryptococcus gattii dispersal to the North American pacific northwest
CC Roe, J Bowers, H Oltean, E DeBess, PJ Dufresne, S McBurney, ...
Msphere 3 (1), 10.1128/msphere. 00499-17, 2018
222018
Phylogeny of the jacchus group of Callithrix marmosets based on complete mitochondrial genomes
J Malukiewicz, CM Hepp, K Guschanski, AC Stone
American Journal of Physical Anthropology 162 (1), 157-169, 2017
222017
Sample pooling methods for efficient pathogen screening: Practical implications
TN Furstenau, JH Cocking, CM Hepp, VY Fofanov
PLoS One 15 (11), e0236849, 2020
192020
Automated characterization of potentially active retroid agents in the human genome
MA McClure, HS Richardson, RA Clinton, CM Hepp, BA Crowther, ...
Genomics 85 (4), 512-523, 2005
192005
Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity
A Fleshman, K Mullins, J Sahl, C Hepp, N Nieto, K Wiggins, H Hornstra, ...
Microbial genomics 4 (9), e000199, 2018
182018
Pathogen to commensal? Longitudinal within-host population dynamics, evolution, and adaptation during a chronic >16-year Burkholderia pseudomallei infection
T Pearson, JW Sahl, CM Hepp, K Handady, H Hornstra, AJ Vazquez, ...
PLoS pathogens 16 (3), e1008298, 2020
172020
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