Immobilization of Escherichia coli RNA Polymerase and Location of Binding Sites by Use of Chromatin Immunoprecipitation and Microarrays CD Herring, M Raffaelle, TE Allen, EI Kanin, R Landick, AZ Ansari, ... Journal of bacteriology 187 (17), 6166-6174, 2005 | 143 | 2005 |
Genome-Scale Analysis of the Uses of the Escherichia coli Genome: Model-Driven Analysis of Heterogeneous Data Sets TE Allen, MJ Herrgard, M Liu, Y Qiu, JD Glasner, FR Blattner, BØ Palsson Journal of bacteriology 185 (21), 6392-6399, 2003 | 122 | 2003 |
Sequence-based analysis of metabolic demands for protein synthesis in prokaryotes TE Allen, BØ Palsson Journal of theoretical biology 220 (1), 1-18, 2003 | 80 | 2003 |
Long-range periodic patterns in microbial genomes indicate significant multi-scale chromosomal organization TE Allen, ND Price, AR Joyce, BØ Palsson PLoS computational biology 2 (1), e2, 2006 | 61 | 2006 |
BME Labs in the Era of COVID-19: Transitioning a Hands-on Integrative Lab Experience to Remote Instruction Using Gamified Lab Simulations TE Allen, SD Barker Biomedical Engineering Education, 2020 | 30 | 2020 |
Work in Progress: A Clinical Immersion Program for Broad Curricular Impact WH Guilford, M Keeley, BP Helmke, TE Allen American Society for Engineering Education Annual Conference & Exposition, 2019 | 11 | 2019 |
Career development and professionalism within a biomedical engineering capstone course TE Allen, SM Peirce American Society for Engineering Education Annual Conference & Exposition, 2008 | 7 | 2008 |
Patient Centered Design in Undergraduate Biomedical Engineering TE Allen, D Chen American Society for Engineering Education Annual Conference & Exposition, 2018 | 6 | 2018 |
Integrative Design and Experimental Analysis: A Yearlong Laboratory Course in Biomedical Engineering TE Allen, BR Backman American Society for Engineering Education Annual Conference & Exposition, 2007 | 6 | 2007 |
Using discrete event simulation to assess obstacle location accuracy in the REMUS unmanned underwater vehicle TE Allen, AH Buss Monterey, California. Naval Postgraduate School, 2012 | 5 | 2012 |
Impact of team and advisor demographics and formulation on the success of biomedical engineering senior design projects AC Taylor, KE Mason, ALP Starling, TE Allen, SM Peirce American Society for Engineering Education Annual Conference & Exposition, 2010 | 4 | 2010 |
Development And Assessment Of A Novel Systems Bioengineering Course Integrating Modeling And Experimentation TE Allen, JJ Saucerman, JA Papin, SM Peirce American Society for Engineering Education Annual Conference & Exposition, 2009 | 2 | 2009 |
Outcomes and Assessment of Three Years of an REU Site in Multi-Scale Systems Bioengineering TE Allen American Society for Engineering Education Annual Conference & Exposition, 2020 | 1 | 2020 |
The Forgotten Steps of Engineering Design: Design-Build Experiences and their Downstream Effect on Capstone Design Projects WH Guilford, TE Allen, SM Peirce American Society for Engineering Education Annual Conference & Exposition, 2017 | 1 | 2017 |
The Effect of In-person versus Pre-recorded Final Presentations on Student Learning Outcomes and Engagement J Leonard-Duke, S Peirce-Cottler, TE Allen 2023 ASEE Annual Conference & Exposition, 2023 | | 2023 |
WIP: Integration of Computational Modeling Active Learning Activities Within a Core Graduate Organ Systems Physiology Course TE Allen 2021 ASEE Virtual Annual Conference Content Access, 2021 | | 2021 |
Retrospective Multi-year Analysis of Team Composition Dynamics and Performance within a Yearlong Integrative BME Laboratory Sequence TE Allen American Society for Engineering Education Annual Conference & Exposition, 2019 | | 2019 |
Systems analysis of genomes: Towards a "topobiology" TE Allen UC San Diego, 2006 | | 2006 |
A custom designed, multi-well, tissue culture plate for use in hematopoietic stem cell migration and division studies. K Francis, J Marciniak, T Allen, B Palsson ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 221, U143-U143, 2001 | | 2001 |
Modeling Transcription and Translation in Prokaryotes: A Constraint-Based Framework and its Application to Data Analysis in Escherichia Coli TE Allen, MJ Herrgård, BØ Palsson | | |