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Dinesh Cyanam
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Establishing guidelines to harmonize tumor mutational burden (TMB): in silico assessment of variation in TMB quantification across diagnostic platforms: phase I of the Friends …
DM Merino, LM McShane, D Fabrizio, V Funari, SJ Chen, JR White, ...
Journal for immunotherapy of cancer 8 (1), 2020
3762020
RNA sequencing of cancer reveals novel splicing alterations
J Eswaran, A Horvath, S Godbole, SD Reddy, P Mudvari, K Ohshiro, ...
Scientific reports 3 (1), 1-12, 2013
2212013
Transcriptomic landscape of breast cancers through mRNA sequencing
J Eswaran, D Cyanam, P Mudvari, SDN Reddy, SB Pakala, SS Nair, ...
Scientific reports 2 (1), 264, 2012
1112012
Aligning tumor mutational burden (TMB) quantification across diagnostic platforms: phase II of the Friends of Cancer Research TMB Harmonization Project
DM Vega, LM Yee, LM McShane, PM Williams, L Chen, T Vilimas, ...
Annals of Oncology 32 (12), 1626-1636, 2021
962021
A scalable solution for tumor mutational burden from formalin- fixed, paraffin-embedded samples using the Oncomine Tumor Mutation Load Assay
R Chaudhary, L Quagliata, J Martin, I Alborelli, D Cyanam, V Mittal, ...
Translational Lung Cancer Research 7 (6), 616-630, 2018
422018
TMB Harmonization Consortium. Establishing guidelines to harmonize tumor mutational burden (TMB): in silico assessment of variation in TMB quantification across diagnostic …
DM Merino, LM McShane, D Fabrizio, V Funari, SJ Chen, JR White, ...
J Immunother Cancer 8 (1), e000147, 2020
182020
Estimating tumor mutation burden using next-generation sequencing assay.
R Chaudhary, J Bishop, A Broomer, D Cyanam, D Mandelman, G Nistala, ...
Journal of Clinical Oncology 35 (15_suppl), e14529-e14529, 2017
52017
Alignment of TMB measured on clinical samples: phase IIb of the friends of cancer research TMB harmonization project
DM Merino, LM Yee, LM McShane, PM Williams, T Vilimas, R Patidar, ...
Cancer Research 80 (16_Supplement), 5671-5671, 2020
42020
Improvement of tumor mutation burden measurement by removal of deaminated bases in FFPE DNA
W Tom, R Chaudhary, V Mittal, D Cyanam, I Casuga, E Wong-Ho, ...
Cancer Research 79 (13_Supplement), 1701-1701, 2019
22019
Oncomine Knowledgebase Reporter: An information management system to link published evidence with cancer gene variants detected by multivariate tests.
S Bandla, D Galimberti, K Kopp, S Anstead, C Zurenko, N Bonevich, ...
Journal of Clinical Oncology 34 (15_suppl), e20667-e20667, 2016
22016
Abstract C256: Expanded clinical opportunities for crizotinib from an analysis of over 5,000 cancer patient exomes.
S Eddy, M Tomilo, ME Urick, NA Khazanov, P Williams, A Bankhead, ...
Molecular Cancer Therapeutics 12 (11_Supplement), C256-C256, 2013
22013
A survey of thousands of tumor exomes and transcriptomes to expand clinical opportunities for crizotinib.
E Bowden, S Eddy, P Williams, N Khazanov, A Bankhead, D Cyanam, ...
Journal of Clinical Oncology 31 (15_suppl), 11017-11017, 2013
22013
Erratum to" Aligning tumor mutational burden (TMB) quantification across diagnostic platforms: phase II of the Friends of Cancer Research TMB Harmonization Project":[Annals of …
DM Vega, LM Yee, LM McShane, PM Williams, L Chen, T Vilimas, ...
Annals of oncology: official journal of the European Society for Medical …, 2024
2024
Rapid and Automated Comprehensive Genomic Profiling to Assess Single-Gene and Complex Biomarkers Including Genomic Instability
M Gupta, Y Jin, E Norris, Y Wang, M Toro, A Phan, Y Zhu, D Wong, ...
JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S108-S109, 2023
2023
Fully automated comprehensive genomic profiling for detection of cancer variants, gene fusions, and complex oncology endpoints
GM Lowman, D Cyanam, E Norris, M Toro, C Nemes, T Puranik, Y Zhu, ...
Cancer Research 83 (7_Supplement), 232-232, 2023
2023
Comprehensive Profiling of Copy Number Changes to Assess Genomic Instability
M Gupta, S Sadis, J Kilzer, V Mittal, D Cyanam, Y Jin, G Lowman, ...
JOURNAL OF MOLECULAR DIAGNOSTICS 24 (10), S109-S109, 2022
2022
Multifaceted Research Application of Comprehensive Genomic Profiling for Detection of Cancer Variants, Gene Fusions, and Complex Oncology Endpoints
D Cyanam, G Lowman, E Norris, J Kilzer, M Toro, J Guo, P Bernardo, ...
JOURNAL OF MOLECULAR DIAGNOSTICS 24 (10), S94-S94, 2022
2022
High-throughput next-generation sequencing research solutions for detection of oncology variants, gene fusion events, and key oncology endpoints
K Zochowski, D Cyanam, G Lowman, J Kilzer, S El-Difrawy, Y Zhu, ...
Cancer Research 82 (12_Supplement), 42-42, 2022
2022
Utilization of a Targeted Next-Generation Sequencing Assay for Assessment of Tumor Cellularity, and Genome-Wide and Gene-Specific Loss of Heterozygosity (LOH)
M Gupta, S Sadis, J Veitch, S Bandla, K Conner, D Cyanam, S El-Difrawy, ...
JOURNAL OF MOLECULAR DIAGNOSTICS 22 (11), S67-S67, 2020
2020
Comprehensive genomic profiling of solid tumors for key targeted and immuno-oncology biomarkers using Ion Torrent NGS technology on the Oncomine Comprehensive Assay Plus (OCA Plus)
V Mittal, J Kilzer, D Cyanam, J Au-Young, S Bandla, G Bee, S El-Difrawy, ...
Cancer Research 80 (16_Supplement), 179-179, 2020
2020
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