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Tomas Sinkunas
Tomas Sinkunas
Senior Researcher, Vilnius University
Verified email at bti.vu.lt
Title
Cited by
Cited by
Year
Cas3 is a single‐stranded DNA nuclease and ATP‐dependent helicase in the CRISPR/Cas immune system
T Sinkunas, G Gasiunas, C Fremaux, R Barrangou, P Horvath, V Siksnys
The EMBO journal 30 (7), 1335-1342, 2011
5892011
Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes
MD Szczelkun, MS Tikhomirova, T Sinkunas, G Gasiunas, T Karvelis, ...
Proceedings of the National Academy of Sciences 111 (27), 9798-9803, 2014
5132014
In vitro reconstitution of Cascade‐mediated CRISPR immunity in Streptococcus thermophilus
T Sinkunas, G Gasiunas, SP Waghmare, MJ Dickman, R Barrangou, ...
The EMBO journal 32 (3), 385-394, 2013
3212013
Directional R-loop formation by the CRISPR-Cas surveillance complex cascade provides efficient off-target site rejection
M Rutkauskas, T Sinkunas, I Songailiene, MS Tikhomirova, V Siksnys, ...
Cell reports 10 (9), 1534-1543, 2015
1802015
Molecular mechanisms of CRISPR-mediated microbial immunity
G Gasiunas, T Sinkunas, V Siksnys
Cellular and molecular life sciences 71, 449-465, 2014
1582014
BREX system of Escherichia coli distinguishes self from non-self by methylation of a specific DNA site
J Gordeeva, N Morozova, N Sierro, A Isaev, T Sinkunas, K Tsvetkova, ...
Nucleic acids research 47 (1), 253-265, 2019
1002019
DnaQ exonuclease‐like domain of Cas2 promotes spacer integration in a type I‐E CRISPR‐Cas system
G Drabavicius, T Sinkunas, A Silanskas, G Gasiunas, Č Venclovas, ...
EMBO reports 19 (7), e45543, 2018
342018
DNA interference is controlled by R-loop length in a type I-F1 CRISPR-Cas system
D Tuminauskaite, D Norkunaite, M Fiodorovaite, S Tumas, I Songailiene, ...
BMC biology 18, 1-16, 2020
182020
Decision-making in Cascade complexes harboring crRNAs of altered length
I Songailiene, M Rutkauskas, T Sinkunas, E Manakova, S Wittig, ...
Cell reports 28 (12), 3157-3166. e4, 2019
132019
A quantitative model for the dynamics of target recognition and off-target rejection by the CRISPR-Cas Cascade complex
M Rutkauskas, I Songailiene, P Irmisch, FE Kemmerich, T Sinkunas, ...
Nature communications 13 (1), 7460, 2022
92022
Cas3 Nuclease–Helicase Activity Assays
T Sinkunas, G Gasiunas, V Siksnys
CRISPR: Methods and Protocols, 277-291, 2015
92015
The energy landscape for R-loop formation by the CRISPR–Cas Cascade complex
DJ Kauert, J Madariaga-Marcos, M Rutkauskas, A Wulfken, I Songailiene, ...
Nature structural & molecular biology 30 (7), 1040-1047, 2023
62023
Dynamic interplay between target search and recognition for a Type I CRISPR-Cas system
P Aldag, M Rutkauskas, J Madariaga-Marcos, I Songailiene, T Sinkunas, ...
Nature communications 14 (1), 3654, 2023
42023
Innate programmable DNA binding by CRISPR-Cas12m effectors enable efficient base editing
G Bigelyte, B Duchovska, R Zedaveinyte, G Sasnauskas, T Sinkunas, ...
Nucleic Acids Research, gkae016, 2024
22024
Dynamic interplay between target search and recognition for the Cascade surveillance complex of type IE CRISPR-Cas systems
P Aldag, M Rutkauskas, J Madariaga-Marcos, I Songailiene, T Sinkunas, ...
bioRxiv, 2022.12. 18.520913, 2022
22022
Disarming of type IF CRISPR-Cas surveillance complex by anti-CRISPR proteins AcrIF6 and AcrIF9
E Kupcinskaite, M Tutkus, A Kopūstas, S Ašmontas, M Jankunec, ...
Scientific reports 12 (1), 15548, 2022
12022
Energy landscapes of CRISPR/Cas R-loop formation from ultrafast twist measurements
JM Marcos, DJ Kauert, M Rutkauskas, A Wulfken, I Songaliene, ...
Biophysical Journal 121 (3), 283a, 2022
2022
Dissecting the Target Recognition by CRISPR/Cas Effector Complexes with Ultrafast Twist Measurements
JM Marcos, DJ Kauert, M Rutkauskas, A Wulfken, I Songaliene, ...
Biophysical Journal 120 (3), 93a-94a, 2021
2021
Investigating and Modelling the Target Recognition Dynamics of the CRISPR-Cas Surveillance Complex Cascade
M Rutkauskas, T Sinkūnas, I Songailiene, V Siksnys, R Seidel
Biophysical Journal 114 (3), 194a, 2018
2018
Target recognition by Cascade complexes bearing altered length crRNA
I Songailiene, M Rutkauskas, T Sinkunas, S Zurhorst, C Schmidt, R Seidel, ...
FEBS JOURNAL 284, 167-167, 2017
2017
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