| Interpretation of differential gene expression results of RNA-seq data: review and integration A McDermaid, B Monier, J Zhao, B Liu, Q Ma Briefings in bioinformatics 20 (6), 2044-2054, 2019 | 226 | 2019 |
| Cancer exosomes induce tumor innervation M Madeo, PL Colbert, DW Vermeer, CT Lucido, JT Cain, EG Vichaya, ... Nature communications 9 (1), 4284, 2018 | 202 | 2018 |
| Neuron-derived exosomes with high miR-21-5p expression promoted polarization of M1 microglia in culture Z Yin, Z Han, T Hu, S Zhang, X Ge, S Huang, L Wang, J Yu, W Li, Y Wang, ... Brain, behavior, and immunity 83, 270-282, 2020 | 103 | 2020 |
| Increases in miR-124-3p in microglial exosomes confer neuroprotective effects by targeting FIP200-mediated neuronal autophagy following traumatic brain injury D Li, S Huang, Z Yin, J Zhu, X Ge, Z Han, J Tan, S Zhang, J Zhao, F Chen, ... Neurochemical research 44, 1903-1923, 2019 | 96 | 2019 |
| It is time to apply biclustering: a comprehensive review of biclustering applications in biological and biomedical data J Xie, A Ma, A Fennell, Q Ma, J Zhao Briefings in bioinformatics 20 (4), 1450-1465, 2019 | 81 | 2019 |
| Exosomes from MiR-21-5p-increased neurons play a role in neuroprotection by suppressing Rab11a-mediated neuronal autophagy in vitro after traumatic brain injury D Li, S Huang, J Zhu, T Hu, Z Han, S Zhang, J Zhao, F Chen, P Lei Medical science monitor: international medical journal of experimental and …, 2019 | 80 | 2019 |
| Bioinformatics tools for quantitative and functional metagenome and metatranscriptome data analysis in microbes SY Niu, J Yang, A McDermaid, J Zhao, Y Kang, Q Ma Briefings in bioinformatics 19 (6), 1415-1429, 2018 | 78 | 2018 |
| Supplementation with Major Royal-Jelly Proteins Increases Lifespan, Feeding, and Fecundity in Drosophila X Xin, Y Chen, D Chen, F Xiao, LD Parnell, J Zhao, L Liu, JM Ordovas, ... Journal of agricultural and food chemistry 64 (29), 5803-5812, 2016 | 71 | 2016 |
| Targeting the Wnt/β-catenin pathway in human osteosarcoma cells F Fang, A VanCleave, R Helmuth, H Torres, K Rickel, H Wollenzien, ... Oncotarget 9 (95), 36780, 2018 | 59 | 2018 |
| Predicting outcomes of chronic kidney disease from EMR data based on Random Forest Regression J Zhao, S Gu, A McDermaid Mathematical biosciences 310, 24-30, 2019 | 48 | 2019 |
| IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis B Monier, A McDermaid, C Wang, J Zhao, A Miller, A Fennell, Q Ma PLoS computational biology 15 (2), e1006792, 2019 | 32 | 2019 |
| Using machine learning to measure relatedness between genes: a multi-features model Y Wang, S Yang, J Zhao, W Du, Y Liang, C Wang, F Zhou, Y Tian, Q Ma Scientific reports 9 (1), 4192, 2019 | 28 | 2019 |
| Artificial intelligence in clinical research of cancers D Shao, Y Dai, N Li, X Cao, W Zhao, L Cheng, Z Rong, L Huang, Y Wang, ... Briefings in Bioinformatics 23 (1), bbab523, 2022 | 23 | 2022 |
| Causal inference for the effect of environmental chemicals on chronic kidney disease J Zhao, P Hinton, J Chen, J Jiang Computational and structural biotechnology journal 18, 93-99, 2020 | 22 | 2020 |
| Integrated microarray analysis provided a new insight of the pathogenesis of Parkinson’s disease P Kong, P Lei, S Zhang, D Li, J Zhao, B Zhang Neuroscience Letters 662, 51-58, 2018 | 22 | 2018 |
| Mesenchymal stromal cell treatment attenuates repetitive mild traumatic brain injury-induced persistent cognitive deficits via suppressing ferroptosis D Wang, S Zhang, X Ge, Z Yin, M Li, M Guo, T Hu, Z Han, X Kong, D Li, ... Journal of neuroinflammation 19 (1), 185, 2022 | 20 | 2022 |
| Changes in motor behavior, neuropathology, and gut microbiota of a Batten disease mouse model following administration of acidified drinking water TB Johnson, LM Langin, J Zhao, JM Weimer, DA Pearce, AD Kovács Scientific Reports 9 (1), 14962, 2019 | 18 | 2019 |
| Effects of High Hydrostatic Pressure on the Physical, Microbial, and Chemical Attributes of Oysters (Crassostrea virginica) T Lingham, M Ye, H Chen, LK Chintapenta, E Handy, J Zhao, C Wu, ... Journal of Food Science 81 (5), M1158-M1166, 2016 | 13 | 2016 |
| A generalized birth and death process for modeling the fates of gene duplication J Zhao, AI Teufel, DA Liberles, L Liu BMC Evolutionary Biology 15, 1-11, 2015 | 13 | 2015 |
| On mechanistic modeling of gene content evolution: birth-death models and mechanisms of gene birth and gene retention AI Teufel, J Zhao, M O’Reilly, L Liu, DA Liberles Computation 2 (3), 112-130, 2014 | 13 | 2014 |
