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Astrid Deschênes
Astrid Deschênes
Computational Scientist at Cold Spring Harbor Laboratory
Verified email at cshl.edu
Title
Cited by
Cited by
Year
Organoid profiling identifies common responders to chemotherapy in pancreatic cancer
H Tiriac, P Belleau, DD Engle, D Plenker, A Deschênes, TDD Somerville, ...
Cancer discovery 8 (9), 1112-1129, 2018
7772018
Development of high‐density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners
N Pavy, F Gagnon, P Rigault, S Blais, A Deschênes, B Boyle, B Pelgas, ...
Molecular ecology resources 13 (2), 324-336, 2013
1002013
Intraductal transplantation models of human pancreatic ductal adenocarcinoma reveal progressive transition of molecular subtypes
K Miyabayashi, LA Baker, A Deschenes, B Traub, G Caligiuri, D Plenker, ...
Cancer discovery, CD-20-0133, 2020
992020
SOAT1 promotes mevalonate pathway dependency in pancreatic cancer
TE Oni, G Biffi, LA Baker, Y Hao, C Tonelli, TDD Somerville, A Deschênes, ...
Journal of Experimental Medicine 217 (9), e20192389, 2020
722020
Bioactivation of Napabucasin Triggers Reactive Oxygen Species–Mediated Cancer Cell Death
FEM Froeling, MM Swamynathan, A Deschênes, IIC Chio, E Brosnan, ...
Clinical Cancer Research 25 (23), 7162-7174, 2019
562019
Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce (Picea mariana)
N Pavy, F Gagnon, A Deschênes, B Boyle, J Beaulieu, J Bousquet
Molecular ecology resources 16 (2), 588-598, 2016
342016
The Landscape of Nucleotide Polymorphism among 13,500 Genes of the Conifer Picea glauca, Relationships with Functions, and Comparison with Medicago truncatula
N Pavy, A Deschênes, S Blais, P Lavigne, J Beaulieu, N Isabel, J Mackay, ...
Genome Biology and Evolution 5 (10), 1910–1925, 2013
302013
Early-Life Exposure to Environmental Contaminants Perturbs the Sperm Epigenome and Induces Negative Pregnancy Outcomes for Three Generations via the Paternal Lineage
C Maurice, M Dalvai, R Lambrot, A Deschênes, MP Scott-Boyer, ...
Epigenomes 5 (2), 10, 2021
202021
Inferring and modeling inheritance of differentially methylated changes across multiple generations
P Belleau, A Deschênes, MP Scott-Boyer, R Lambrot, M Dalvai, ...
Nucleic acids research 46 (14), e85-e85, 2018
152018
metagene Profiles Analyses Reveal Regulatory Element’s Factor-Specific Recruitment Patterns
C Joly Beauparlant, FC Lamaze, A Deschênes, R Samb, A Lemaçon, ...
PLoS computational biology 12 (8), e1004751, 2016
142016
Using informative Multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling
R Samb, K Khadraoui, P Belleau, A Deschênes, L Lakhal-Chaieb, A Droit
Statistical Applications in Genetics and Molecular Biology 14 (6), 517-532, 2015
102015
Genetic ancestry inference from cancer-derived molecular data across genomic and transcriptomic platforms
P Belleau, A Deschênes, N Chambwe, DA Tuveson, A Krasnitz
Cancer research 83 (1), 49-58, 2023
62023
Loss of p53 tumor suppression function drives invasion and genomic instability in models of murine pancreatic cancer
C Tonelli, A Deschênes, MA Yao, Y Park, DA Tuveson
bioRxiv, 2021.12. 31.472823, 2022
52022
metagene: A package to produce metagene plots
CJ Beauparlant, FC Lamaze, R Samb, C Lippens, AL Deschenes, A Droit
R package version 1 (0), 2014
52014
SPDEF promotes the classical subtype of pancreatic ductal adenocarcinoma
C Tonelli, GN Yordanov, Y Hao, A Deschênes, O Klingbeil, HC Ting, ...
bioRxiv, 2022.03. 18.484951, 2022
42022
A mucus production programme promotes classical pancreatic ductal adenocarcinoma
C Tonelli, GN Yordanov, Y Hao, A Deschênes, J Hinds, P Belleau, ...
Gut, 2024
12024
GATA6 amplification is associated with improved survival of TP53-mutated pancreatic cancer
JI Yang, A Habowski, A Deschênes, P Belleau, T Ha, E Zhou, ...
medRxiv, 2023.03. 06.23286147, 2023
2023
Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms
P Belleau, A Deschênes, DA Tuveson, A Krasnitz
BioRxiv, 2022.02. 01.478737, 2022
2022
Validating that a specific subnetwork has significantly more interactions than expected by randomness
P Belleau, A Deschênes, M Boutchueng-Djidjou, RL Faure
https://dx.doi.org/10.17504/protocols.io.sdqea5w, 2018
2018
Epigenetic And Transgenerational Health Effects Of Early-life Paternal Exposure To Environmental Contaminants In A Rat Model
J Bailey, R Lambrot, D Chan, S Mcgraw, C Maurice, A Droit, A Deschenes, ...
Andrology 4, 105, 2016
2016
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