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Astrid Deschênes
Astrid Deschênes
Computational Scientist at Cold Spring Harbor Laboratory
Adresse e-mail validée de cshl.edu
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Année
Organoid profiling identifies common responders to chemotherapy in pancreatic cancer
H Tiriac, P Belleau, DD Engle, D Plenker, A Deschênes, TDD Somerville, ...
Cancer discovery 8 (9), 1112-1129, 2018
7852018
Intraductal transplantation models of human pancreatic ductal adenocarcinoma reveal progressive transition of molecular subtypes
K Miyabayashi, LA Baker, A Deschenes, B Traub, G Caligiuri, D Plenker, ...
Cancer discovery, CD-20-0133, 2020
1002020
Development of high‐density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners
N Pavy, F Gagnon, P Rigault, S Blais, A Deschênes, B Boyle, B Pelgas, ...
Molecular ecology resources 13 (2), 324-336, 2013
1002013
SOAT1 promotes mevalonate pathway dependency in pancreatic cancer
TE Oni, G Biffi, LA Baker, Y Hao, C Tonelli, TDD Somerville, A Deschênes, ...
Journal of Experimental Medicine 217 (9), e20192389, 2020
752020
Bioactivation of Napabucasin Triggers Reactive Oxygen Species–Mediated Cancer Cell Death
FEM Froeling, MM Swamynathan, A Deschênes, IIC Chio, E Brosnan, ...
Clinical Cancer Research 25 (23), 7162-7174, 2019
572019
Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce (Picea mariana)
N Pavy, F Gagnon, A Deschênes, B Boyle, J Beaulieu, J Bousquet
Molecular ecology resources 16 (2), 588-598, 2016
342016
The Landscape of Nucleotide Polymorphism among 13,500 Genes of the Conifer Picea glauca, Relationships with Functions, and Comparison with Medicago truncatula
N Pavy, A Deschênes, S Blais, P Lavigne, J Beaulieu, N Isabel, J Mackay, ...
Genome Biology and Evolution 5 (10), 1910–1925, 2013
302013
Early-Life Exposure to Environmental Contaminants Perturbs the Sperm Epigenome and Induces Negative Pregnancy Outcomes for Three Generations via the Paternal Lineage
C Maurice, M Dalvai, R Lambrot, A Deschênes, MP Scott-Boyer, ...
Epigenomes 5 (2), 10, 2021
202021
Inferring and modeling inheritance of differentially methylated changes across multiple generations
P Belleau, A Deschênes, MP Scott-Boyer, R Lambrot, M Dalvai, ...
Nucleic acids research 46 (14), e85-e85, 2018
152018
metagene Profiles Analyses Reveal Regulatory Element’s Factor-Specific Recruitment Patterns
C Joly Beauparlant, FC Lamaze, A Deschênes, R Samb, A Lemaçon, ...
PLoS computational biology 12 (8), e1004751, 2016
142016
Using informative Multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling
R Samb, K Khadraoui, P Belleau, A Deschênes, L Lakhal-Chaieb, A Droit
Statistical Applications in Genetics and Molecular Biology 14 (6), 517-532, 2015
102015
Genetic ancestry inference from cancer-derived molecular data across genomic and transcriptomic platforms
P Belleau, A Deschênes, N Chambwe, DA Tuveson, A Krasnitz
Cancer research 83 (1), 49-58, 2023
62023
Loss of p53 tumor suppression function drives invasion and genomic instability in models of murine pancreatic cancer
C Tonelli, A Deschênes, MA Yao, Y Park, DA Tuveson
bioRxiv, 2021.12. 31.472823, 2022
52022
metagene: A package to produce metagene plots
CJ Beauparlant, FC Lamaze, R Samb, C Lippens, AL Deschenes, A Droit
R package version 1 (0), 2014
52014
SPDEF promotes the classical subtype of pancreatic ductal adenocarcinoma
C Tonelli, GN Yordanov, Y Hao, A Deschênes, O Klingbeil, HC Ting, ...
bioRxiv, 2022.03. 18.484951, 2022
42022
A mucus production programme promotes classical pancreatic ductal adenocarcinoma
C Tonelli, GN Yordanov, Y Hao, A Deschênes, J Hinds, P Belleau, ...
Gut, 2024
12024
GATA6 amplification is associated with improved survival of TP53-mutated pancreatic cancer
JI Yang, A Habowski, A Deschênes, P Belleau, T Ha, E Zhou, ...
medRxiv, 2023.03. 06.23286147, 2023
2023
Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms
P Belleau, A Deschênes, DA Tuveson, A Krasnitz
BioRxiv, 2022.02. 01.478737, 2022
2022
Validating that a specific subnetwork has significantly more interactions than expected by randomness
P Belleau, A Deschênes, M Boutchueng-Djidjou, RL Faure
https://dx.doi.org/10.17504/protocols.io.sdqea5w, 2018
2018
Epigenetic And Transgenerational Health Effects Of Early-life Paternal Exposure To Environmental Contaminants In A Rat Model
J Bailey, R Lambrot, D Chan, S Mcgraw, C Maurice, A Droit, A Deschenes, ...
Andrology 4, 105, 2016
2016
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