MEG3 long noncoding RNA regulates the TGF-β pathway genes through formation of RNA–DNA triplex structures T Mondal, S Subhash, R Vaid, S Enroth, S Uday, B Reinius, S Mitra, ... Nature communications 6 (1), 7743, 2015 | 616 | 2015 |
Independence of chromatin conformation and gene regulation during Drosophila dorsoventral patterning E Ing-Simmons, R Vaid, XY Bing, M Levine, M Mannervik, JM Vaquerizas Nature genetics 53 (4), 487-499, 2021 | 112 | 2021 |
Release of promoter–proximal paused Pol II in response to histone deacetylase inhibition R Vaid, J Wen, M Mannervik Nucleic acids research 48 (9), 4877-4890, 2020 | 35 | 2020 |
CBP binding outside of promoters and enhancers in Drosophila melanogaster P Philip, A Boija, R Vaid, AM Churcher, DJ Meyers, PA Cole, M Mannervik, ... Epigenetics & chromatin 8, 1-12, 2015 | 28 | 2015 |
A unique histone 3 lysine 14 chromatin signature underlies tissue-specific gene regulation I Regadas, O Dahlberg, R Vaid, O Ho, S Belikov, G Dixit, S Deindl, J Wen, ... Molecular Cell 81 (8), 1766-1780. e10, 2021 | 20 | 2021 |
Investigation of the host transcriptional response to intracellular bacterial infection using Dictyostelium discoideum as a host model J Kjellin, M Pränting, F Bach, R Vaid, B Edelbroek, Z Li, MP Hoeppner, ... BMC genomics 20, 1-18, 2019 | 14 | 2019 |
MEG3 long noncoding RNA regulates the TGF-β pathway genes through formation of RNA-DNA triplex structures. Nat Commun. 2015; 6: 7743 T Mondal, S Subhash, R Vaid, S Enroth, S Uday, B Reinius, S Mitra, ... External Resources Pubmed/Medline (NLM) Crossref (DOI), 0 | 11 | |
Global loss of cellular m6A RNA methylation following infection with different SARS-CoV-2 variants R Vaid, A Mendez, K Thombare, R Burgos-Panadero, R Robinot, ... Genome Research 33 (3), 299-313, 2023 | 10 | 2023 |
Author Correction: MEG3 long noncoding RNA regulates the TGF-β pathway genes through formation of RNA–DNA triplex structures T Mondal, S Subhash, R Vaid, S Enroth, S Uday, B Reinius, S Mitra, ... Nature Communications 10, 2019 | 9 | 2019 |
Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network G Hunt, R Vaid, S Pirogov, A Pfab, C Ziegenhain, R Sandberg, ... Genome Biology 25 (1), 2, 2024 | 2 | 2024 |
METTL3 drives telomere targeting of TERRA lncRNA through m6A-dependent R-loop formation: a therapeutic target for ALT-positive neuroblastoma R Vaid, K Thombare, A Mendez, R Burgos-Panadero, A Djos, ... Nucleic Acids Research 52 (5), 2648-2671, 2024 | 1 | 2024 |
Comprehensive interrogation of a Drosophila embryonic patterning network reveals the impact of chromatin state on tissue-specific burst kinetics and RNA … G Hunt, R Vaid, S Pirogov, A Pfab, C Ziegenhain, R Sandberg, ... bioRxiv, 2022.10. 25.513691, 2022 | 1 | 2022 |
Telomere Maintenance Mechanisms in a Cohort of High-Risk Neuroblastoma Tumors and Its Relation to Genomic Variants in the TERT and ATRX Genes A Djos, K Thombare, R Vaid, J Gaarder, G Umapathy, SE Reinsbach, ... Cancers 15 (24), 5732, 2023 | | 2023 |
METTL3/MYCN cooperation drives neural crest differentiation and provides therapeutic vulnerability in neuroblastoma K Thombare, R Vaid, P Pucci, A Mendez, R Burgos-Panadero, ... bioRxiv, 2023.10. 06.561194, 2023 | | 2023 |
Global loss of cellular m6A RNA methylation following infection with different SARS-CoV-2 variants (preprint) R Vaid, A Mendez, K Thombare, R Burgos-Panadero, R Robinot, ... | | 2022 |
Transcription regulation across levels of chromatin organization R Vaid Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm …, 2020 | | 2020 |
RNA polymerase II promoter-proximal pause release is key to dorso-ventral patterning of the early Drosophila embryo R Vaid, G Hunt, J Reimegård, M Mannervik | | 2020 |
MEG3 long noncoding RNA regulates the TGF-beta pathway genes through formation of RNA-DNA triplex structures (vol 6, 7743, 2015) T Mondal, S Subhash, R Vaid, S Enroth, S Uday, B Reinius, S Mitra, ... NATURE COMMUNICATIONS 10, 2019 | | 2019 |
Erratum to: CBP binding outside of promoters and enhancers in Drosophila melanogaster P Philip, A Boija, R Vaid, AM Churcher, DJ Meyers, PA Cole, M Mannervik, ... Epigenetics & Chromatin 9 (1), 38-38, 2016 | | 2016 |
CBP binding outside of promoters and enhancers in Drosophila melanogaster (vol 8, 48, 2015) P Philip, A Boija, R Vaid, AM Churcher, DJ Meyers, PA Cole, M Mannervik, ... EPIGENETICS & CHROMATIN 9, 2016 | | 2016 |