Ruth E. Ley

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Rob KnightDirector, Center for Microbiome Innovation; Professor, Pediatrics, Bioengineering and CSE, UCSDVerified email at ucsd.edu
Omry KorenProfessor, Bar Ilan University, IsraelVerified email at biu.ac.il
Julia GoodrichGraduate Student, Cornell UniversityVerified email at cornell.edu
Peter TurnbaughUniversity of California, San FranciscoVerified email at ucsf.edu
Angela C PooleCornell UniversityVerified email at cornell.edu
Jillian WatersMax Planck Institute for Developmental BiologyVerified email at tuebingen.mpg.de
Jordana T BellKing's College LondonVerified email at kcl.ac.uk
Largus T AngenentProfessor of Environmental Biotechnology, University of TübingenVerified email at uni-tuebingen.de
Catherine LozuponeAssociate Professor of Medicine, University of Colorado, DenverVerified email at ucdenver.edu
William A WaltersPost-doc, Cornell UniversityVerified email at colorado.edu
Daniel A Peterson MD/PhDAstraZenecaVerified email at astrazeneca.com
Klein SamuelVerified email at dom.wustl.edu
Jeff DanglProfessor--HHMI and Dept of Biology; UNC-Chapel HillVerified email at email.unc.edu
Matam Vijay-KumarProfessor, The University of Toledo College of Medicine and Life SciencesVerified email at utoledo.edu
Jeffrey J. WernerAssociate Professor, Chemistry Department, SUNY CortlandVerified email at cortland.edu
Bernard HenrissatTechnical University of Denmark / King Abdulaziz University / CNRS MarseilleVerified email at univ-amu.fr
Antonio GonzálezProgrammer Analyst, UC San DiegoVerified email at ucsd.edu
Susannah TringeEnvironmental Genomics and Systems Biology, Lawrence Berkeley National LaboratoryVerified email at lbl.gov
Matthew A. Jackson-WoodMiroBio Ltd; Prev. Postdoc, University of OxfordVerified email at kennedy.ox.ac.uk
S K SchmidtProfessor of Biology, University of Colorado, BoulderVerified email at colorado.edu

Ruth E. Ley

Department of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen

Verified email at tuebingen.mpg.de - Homepage

microbiome microbial ecology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
QIIME allows analysis of high-throughput community sequencing data JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ... Nature methods 7 (5), 335-336, 2010	26245	2010
An obesity-associated gut microbiome with increased capacity for energy harvest PJ Turnbaugh, RE Ley, MA Mahowald, V Magrini, ER Mardis, JI Gordon nature 444 (7122), 1027-1031, 2006	10470	2006
Human gut microbes associated with obesity RE Ley, PJ Turnbaugh, S Klein, JI Gordon nature 444 (7122), 1022-1023, 2006	8051	2006
A core gut microbiome in obese and lean twins PJ Turnbaugh, M Hamady, T Yatsunenko, BL Cantarel, A Duncan, RE Ley, ... nature 457 (7228), 480-484, 2009	7305	2009
Structure, function and diversity of the healthy human microbiome Human Microbiome Project Consortium nature 486 (7402), 207, 2012	7209	2012
Obesity alters gut microbial ecology RE Ley, F Bäckhed, P Turnbaugh, CA Lozupone, RD Knight, JI Gordon Proceedings of the national academy of sciences 102 (31), 11070-11075, 2005	5779	2005
Host-bacterial mutualism in the human intestine F Bäckhed, RE Ley, JL Sonnenburg, DA Peterson, JI Gordon science 307 (5717), 1915-1920, 2005	5100	2005
The human microbiome project PJ Turnbaugh, RE Ley, M Hamady, CM Fraser-Liggett, R Knight, ... Nature 449 (7164), 804-810, 2007	5088	2007
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019	3395	2019
Ecological and evolutionary forces shaping microbial diversity in the human intestine RE Ley, DA Peterson, JI Gordon Cell 124 (4), 837-848, 2006	3310	2006
Evolution of mammals and their gut microbes RE Ley, M Hamady, C Lozupone, PJ Turnbaugh, RR Ramey, JS Bircher, ... science 320 (5883), 1647-1651, 2008	3124	2008
Succession of microbial consortia in the developing infant gut microbiome JE Koenig, A Spor, N Scalfone, AD Fricker, J Stombaugh, R Knight, ... Proceedings of the National Academy of Sciences 108 (Supplement 1), 4578-4585, 2011	2412	2011
Human genetics shape the gut microbiome JK Goodrich, JL Waters, AC Poole, JL Sutter, O Koren, R Blekhman, ... Cell 159 (4), 789-799, 2014	2129	2014
Metabolic syndrome and altered gut microbiota in mice lacking Toll-like receptor 5 M Vijay-Kumar, JD Aitken, FA Carvalho, TC Cullender, S Mwangi, ... Science 328 (5975), 228-231, 2010	2010	2010
Innate immunity and intestinal microbiota in the development of Type 1 diabetes L Wen, RE Ley, PY Volchkov, PB Stranges, L Avanesyan, AC Stonebraker, ... Nature 455 (7216), 1109-1113, 2008	1904	2008
Defining the core Arabidopsis thaliana root microbiome DS Lundberg, SL Lebeis, SH Paredes, S Yourstone, J Gehring, S Malfatti, ... Nature 488 (7409), 86-90, 2012	1881	2012
A framework for human microbiome research BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ... nature 486 (7402), 215, 2012	1755	2012
Worlds within worlds: evolution of the vertebrate gut microbiota RE Ley, CA Lozupone, M Hamady, R Knight, JI Gordon Nature Reviews Microbiology 6 (10), 776-788, 2008	1542	2008
Host remodeling of the gut microbiome and metabolic changes during pregnancy O Koren, JK Goodrich, TC Cullender, A Spor, K Laitinen, HK Bäckhed, ... Cell 150 (3), 470-480, 2012	1430	2012
Unravelling the effects of the environment and host genotype on the gut microbiome A Spor, O Koren, R Ley Nature Reviews Microbiology 9 (4), 279-290, 2011	1301	2011

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