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Xu-Kai Ma
Xu-Kai Ma
CAS-MPG Partner Institute for Computational Biology, SINH, CAS
Verified email at picb.ac.cn - Homepage
Title
Cited by
Cited by
Year
Distinct processing of lncRNAs contributes to non-conserved functions in stem cells
CJ Guo, XK Ma, YH Xing, CC Zheng, YF Xu, L Shan, J Zhang, S Wang, ...
Cell 181 (3), 621-636. e22, 2020
2202020
CIRCpedia v2: an updated database for comprehensive circular RNA annotation and expression comparison
R Dong, XK Ma, GW Li, L Yang
Genomics, Proteomics and Bioinformatics 16 (4), 226-233, 2018
2132018
Circular RNAs negatively regulate cancer stem cells by physically binding FMRP against CCAR1 complex in hepatocellular carcinoma
YJ Zhu, B Zheng, GJ Luo, XK Ma, XY Lu, XM Lin, S Yang, Q Zhao, T Wu, ...
Theranostics 9 (12), 3526, 2019
2022019
Increased complexity of circRNA expression during species evolution
R Dong, XK Ma, LL Chen, L Yang
RNA biology 14 (8), 1064-1074, 2017
1982017
CircRNA-derived pseudogenes
R Dong, XO Zhang, Y Zhang, XK Ma, LL Chen, L Yang
Cell research 26 (6), 747-750, 2016
1132016
CIRCexplorer3: a CLEAR pipeline for direct comparison of circular and linear RNA expression
XK Ma, MR Wang, CX Liu, R Dong, GG Carmichael, LL Chen, L Yang
Genomics, Proteomics and Bioinformatics 17 (5), 511-521, 2019
592019
A guide to naming eukaryotic circular RNAs
LL Chen, A Bindereif, I Bozzoni, HY Chang, AG Matera, M Gorospe, ...
Nature cell biology 25 (1), 1-5, 2023
332023
Genome-wide annotation of circRNAs and their alternative back-splicing/splicing with CIRCexplorer pipeline
R Dong, XK Ma, LL Chen, L Yang
Epitranscriptomics: Methods and Protocols, 137-149, 2019
242019
CIRCexplorer pipelines for circRNA annotation and quantification from non-polyadenylated RNA-seq datasets
XK Ma, W Xue, LL Chen, L Yang
Methods 196, 3-10, 2021
222021
Knockout of circRNAs by base editing back-splice sites of circularized exons
X Gao, XK Ma, X Li, GW Li, CX Liu, J Zhang, Y Wang, J Wei, J Chen, ...
Genome Biology 23, 1-22, 2022
212022
A CLEAR pipeline for direct comparison of circular and linear RNA expression
XK Ma, MR Wang, CX Liu, R Dong, GG Carmichael, LL Chen, L Yang
bioRxiv, 668657, 2019
22019
Fast and furious: insights of back splicing regulation during nascent RNA synthesis
W Xue, XK Ma, L Yang
Science China Life Sciences 64, 1050-1061, 2021
12021
Circular RNAs regulate cancer stem cells by FMRP against CCAR1 complex in hepatocellular carcinoma
YJ Zhu, B Zheng, XK Ma, XY Lu, XM Lin, GJ Luo, S Yang, Q Zhao, X Chen, ...
bioRxiv, 396069, 2018
2018
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