Siavash Mirarab - Google Scholar Citations

Cited by

	All	Since 2014
Citations	5988	5718
h-index	33	30
i10-index	47	47

1900

950

475

1425

2009201020112012201320142015201620172018201924 32 43 53 80 149 532 789 981 1429 1812

Co-authors

Tandy WarnowFounder Professor of Computer Science, UIUCVerified email at illinois.edu
Ladan TahvildariProfessor, University of WaterlooVerified email at uwaterloo.ca
Erfan SayyariUniversity of California, San DiegoVerified email at eng.ucsd.edu
Md. Shamsuzzoha BayzidUniversity of Texas at AustinVerified email at cs.utexas.edu
Nam-Phuong D NguyenSenior Scientist, BioinformaticsVerified email at cs.utah.edu
Théo ZimmermannIRIF, Université Paris-Diderot & πr² project-team, InriaVerified email at irif.fr
Bastien BoussauCNRS researcher, Université de LyonVerified email at univ-lyon1.fr
Maryam RabieePhD StudentVerified email at eng.ucsd.edu
Gregg RothermelProfessor of Computer Science, University of Nebraska - LincolnVerified email at cse.unl.edu
Hyunsook DoComputer Science and Engineering, University of North TexasVerified email at unt.edu
Mehdi AmouiUniversity of WaterlooVerified email at uwaterloo.ca
Ruth DavidsonUniversity of Illinois Urbana-ChampaignVerified email at illinois.edu
Vineet BafnaProfessor, Computer Science & Engineering, University of California, San DiegoVerified email at cs.ucsd.edu
Michael NuteUniversity of Illinois at Urbana-ChampaignVerified email at illinois.edu
Li-San WangUniversity of PennsylvaniaVerified email at upenn.edu
Carsten RahbekProfessor of Macroecology, Center for Macroecology, Evolution and Climate, Copenhagen & ImperialVerified email at snm.ku.dk
James E. TarverUniversity of BristolVerified email at bristol.ac.uk
Davide PisaniProfessor of Phylogenomics. Schools of Biological & Earth Sciences. University of Bristol (UK)Verified email at bristol.ac.uk
Mario dos ReisLecturer at Queen Mary University of LondonVerified email at qmul.ac.uk
Dr Mary J. O'ConnellThe University Of NottinghamVerified email at nottingham.ac.uk

Siavash Mirarab

University of California at San Diego

Verified email at ucsd.edu - Homepage

Computational Biology Phylogenetics Multiple Sequence Alignment


Title	Cited by	Year
Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346 (6215), 1320-1331, 2014	1077	2014
Phylotranscriptomic analysis of the origin and early diversification of land plants NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ... Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014	669	2014
ASTRAL: genome-scale coalescent-based species tree estimation S Mirarab, R Reaz, MS Bayzid, T Zimmermann, MS Swenson, T Warnow Bioinformatics 30 (17), i541-i548, 2014	514	2014
ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes S Mirarab, T Warnow Bioinformatics 31 (12), i44-i52, 2015	454	2015
A communal catalogue reveals Earth’s multiscale microbial diversity LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ... Nature 551 (7681), 457, 2017	436	2017
Data access for the 1,000 Plants (1KP) project N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ... Gigascience 3 (1), 2047-217X-3-17, 2014	324	2014
Fast coalescent-based computation of local branch support from quartet frequencies E Sayyari, S Mirarab Molecular biology and evolution 33 (7), 1654-1668, 2016	190	2016
Statistical binning enables an accurate coalescent-based estimation of the avian tree S Mirarab, MS Bayzid, B Boussau, T Warnow Science 346 (6215), 1250463, 2014	154	2014
Evaluating summary methods for multilocus species tree estimation in the presence of incomplete lineage sorting S Mirarab, MS Bayzid, T Warnow Systematic Biology 65 (3), 366-380, 2014	148	2014
PASTA: ultra-large multiple sequence alignment for nucleotide and amino-acid sequences S Mirarab, N Nguyen, S Guo, LS Wang, J Kim, T Warnow Journal of Computational Biology 22 (5), 377-386, 2015	147	2015
The effects of time constraints on test case prioritization: A series of controlled experiments H Do, S Mirarab, L Tahvildari, G Rothermel IEEE Transactions on Software Engineering 36 (5), 593-617, 2010	147	2010
ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees C Zhang, M Rabiee, E Sayyari, S Mirarab BMC bioinformatics 19 (6), 153, 2018	119	2018
The interrelationships of placental mammals and the limits of phylogenetic inference JE Tarver, M Dos Reis, S Mirarab, RJ Moran, S Parker, JE O’Reilly, ... Genome Biology and Evolution 8 (2), 330-344, 2016	110	2016
MRL and SuperFine+ MRL: new supertree methods N Nguyen, S Mirarab, T Warnow Algorithms for Molecular Biology 7 (1), 3, 2012	97	2012
An empirical study of the effect of time constraints on the cost-benefits of regression testing H Do, S Mirarab, L Tahvildari, G Rothermel Proceedings of the 16th ACM SIGSOFT International Symposium on Foundations …, 2008	78	2008
A prioritization approach for software test cases based on bayesian networks S Mirarab, L Tahvildari International Conference on Fundamental Approaches to Software Engineering …, 2007	75	2007
American gut: an open platform for citizen science microbiome research D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ... mSystems 3 (3), e00031-18, 2018	74	2018
Weighted Statistic Binning: enabling statistically consistent genome-scale Phylogenetic Analyses M Bayzid, S Mirarab, T Warnow PLoS ONE 10 (6), e0129183, 2015	73	2015
Size-constrained regression test case selection using multicriteria optimization S Mirarab, S Akhlaghi, L Tahvildari IEEE transactions on Software Engineering 38 (4), 936-956, 2011	71	2011
A comparative study of SVDquartets and other coalescent-based species tree estimation methods J Chou, A Gupta, S Yaduvanshi, R Davidson, M Nute, S Mirarab, ... BMC genomics 16 (10), S2, 2015	70	2015

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Upload PDF

Follow this author

Cited by

Co-authors