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Akshay Kakumanu
Akshay Kakumanu
Foundation Medicine
Verified email at psu.edu - Homepage
Title
Cited by
Cited by
Year
The pioneer transcription factor FoxA maintains an accessible nucleosome configuration at enhancers for tissue-specific gene activation
M Iwafuchi-Doi, G Donahue, A Kakumanu, JA Watts, S Mahony, BF Pugh, ...
Molecular cell 62 (1), 79-91, 2016
4012016
Effects of drought on gene expression in maize reproductive and leaf meristem tissue revealed by RNA-Seq
A Kakumanu, MMR Ambavaram, C Klumas, A Krishnan, U Batlang, ...
Plant physiology 160 (2), 846-867, 2012
3722012
Proneural factors Ascl1 and Neurog2 contribute to neuronal subtype identities by establishing distinct chromatin landscapes
B Aydin, A Kakumanu, M Rossillo, M Moreno-Estellés, G Garipler, ...
Nature neuroscience 22 (6), 897-908, 2019
1192019
A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells
S Velasco*, MM Ibrahim*, A Kakumanu*, G Garipler, B Aydin, ...
Cell Stem Cell, 2016
992016
An integrated model of multiple-condition ChIP-Seq data reveals predeterminants of Cdx2 binding
S Mahony, MD Edwards, EO Mazzoni, RI Sherwood, A Kakumanu, ...
PLoS computational biology 10 (3), e1003501, 2014
842014
Metabolic and transcriptional reprogramming in developing soybean (Glycine max) embryos
E Collakova, D Aghamirzaie, Y Fang, C Klumas, F Tabataba, ...
Metabolites 3 (2), 347-372, 2013
732013
Deconvolving sequence features that discriminate between overlapping regulatory annotations
A Kakumanu, S Velasco, E Mazzoni, S Mahony
PLoS computational biology 13 (10), e1005795, 2017
162017
Computational Modelling of Sequence Features Driving Transcription Factor Binding in Neuronal Reprogramming
A Kakumanu
The Pennsylvania State University, 2017
2017
Metabolic and Transcriptional Reprogramming in Developing Soybean (Glycine max) Embryos
R Grene, LS Heath, E Myers, F Tabataba, A Kakumanu, C Klumas, ...
2013
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