| Mammalian ncRNA-disease repository: a global view of ncRNA-mediated disease network Y Wang, L Chen, B Chen, X Li, J Kang, K Fan, Y Hu, J Xu, L Yi, J Yang, ... Cell death & disease 4 (8), e765-e765, 2013 | 94 | 2013 |
| Evolutionary constraint and innovation across hundreds of placental mammals MJ Christmas, IM Kaplow, DP Genereux, MX Dong, GM Hughes, X Li, ... Science 380 (6643), eabn3943, 2023 | 72 | 2023 |
| Evolutionarily conserved pachytene piRNA loci are highly divergent among modern humans DM Özata, T Yu, H Mou, I Gainetdinov, C Colpan, K Cecchini, Y Kaymaz, ... Nature Ecology & Evolution 4 (1), 156-168, 2020 | 70 | 2020 |
| RAID: a comprehensive resource for human RNA-associated (RNA–RNA/RNA–protein) interaction X Zhang, D Wu, L Chen, X Li, J Yang, D Fan, T Dong, M Liu, P Tan, J Xu, ... Rna 20 (7), 989-993, 2014 | 58 | 2014 |
| Differential analysis of chromatin accessibility and histone modifications for predicting mouse developmental enhancers S Fu, Q Wang, JE Moore, MJ Purcaro, HE Pratt, K Fan, C Gu, C Jiang, ... Nucleic acids research 46 (21), 11184-11201, 2018 | 44 | 2018 |
| Annotation of chromatin states in 66 complete mouse epigenomes during development A van der Velde, K Fan, J Tsuji, JE Moore, MJ Purcaro, HE Pratt, Z Weng Communications biology 4 (1), 1-15, 2021 | 42 | 2021 |
| Mammalian evolution of human cis-regulatory elements and transcription factor binding sites G Andrews, K Fan, HE Pratt, N Phalke, Zoonomia Consortium §, ... Science 380 (6643), eabn7930, 2023 | 26 | 2023 |
| Full characterization of localization diversity in the human protein interactome L Cheng, K Fan, Y Huang, D Wang, KS Leung Journal of proteome research 16 (8), 3019-3029, 2017 | 23 | 2017 |
| Long first exons and epigenetic marks distinguish conserved pachytene piRNA clusters from other mammalian genes T Yu, K Fan, DM Özata, G Zhang, Y Fu, WE Theurkauf, PD Zamore, ... Nature Communications 12 (1), 73, 2021 | 19 | 2021 |
| Genetic and epigenetic features of promoters with ubiquitous chromatin accessibility support ubiquitous transcription of cell-essential genes K Fan, JE Moore, X Zhang, Z Weng Nucleic acids research 49 (10), 5705-5725, 2021 | 11 | 2021 |
| Integration of high-resolution promoter profiling assays reveals novel, cell type–specific transcription start sites across 115 human cell and tissue types JE Moore, XO Zhang, SI Elhajjajy, K Fan, HE Pratt, F Reese, A Mortazavi, ... Genome Research 32 (2), 389-402, 2022 | 7 | 2022 |
| An encyclopedia of enhancer-gene regulatory interactions in the human genome AR Gschwind, KS Mualim, A Karbalayghareh, MU Sheth, KK Dey, ... bioRxiv, 2023.11. 09.563812, 2023 | 4 | 2023 |
| Toward a comprehensive catalog of regulatory elements K Fan, E Pfister, Z Weng Human Genetics, 2023 | 3 | 2023 |
Zhiping WengProf & Chair, Department of Genomics and Computational Biology, UMASS Medical SchoolVerified email at umassmed.edu
