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James Chen
James Chen
Postdoctoral Fellow, NYU School of Medicine
Verified email at nyulangone.org
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Cited by
Year
Structural basis for helicase-polymerase coupling in the SARS-CoV-2 replication-transcription complex
J Chen, B Malone, E Llewellyn, M Grasso, PMM Shelton, PDB Olinares, ...
Cell 182 (6), 1560-1573. e13, 2020
4042020
Structural basis for NusA stabilized transcriptional pausing
X Guo, AG Myasnikov, J Chen, C Crucifix, G Papai, M Takacs, P Schultz, ...
Molecular cell 69 (5), 816-827. e4, 2018
1472018
Structural basis of transcription arrest by coliphage HK022 Nun in an Escherichia coli RNA polymerase elongation complex
JY Kang, PDB Olinares, J Chen, EA Campbell, A Mustaev, BT Chait, ...
Elife 6, e25478, 2017
1192017
Eliminating effects of particle adsorption to the air/water interface in single-particle cryo-electron microscopy: Bacterial RNA polymerase and CHAPSO
J Chen, AJ Noble, JY Kang, SA Darst
Journal of structural biology: X 1, 100005, 2019
1172019
Time-resolved cryo-EM using Spotiton
VP Dandey, WC Budell, H Wei, D Bobe, K Maruthi, M Kopylov, ET Eng, ...
Nature methods 17 (9), 897-900, 2020
1152020
Stepwise promoter melting by bacterial RNA polymerase
J Chen, C Chiu, S Gopalkrishnan, AY Chen, PDB Olinares, RM Saecker, ...
Molecular cell 78 (2), 275-288. e6, 2020
1012020
Structures of an RNA polymerase promoter melting intermediate elucidate DNA unwinding
H Boyaci, J Chen, R Jansen, SA Darst, EA Campbell
Nature 565 (7739), 382-385, 2019
972019
Requirements for catalysis in the Cre recombinase active site
B Gibb, K Gupta, K Ghosh, R Sharp, J Chen, GD Van Duyne
Nucleic acids research 38 (17), 5817-5832, 2010
972010
Structural basis for backtracking by the SARS-CoV-2 replication–transcription complex
B Malone, J Chen, Q Wang, E Llewellyn, YJ Choi, PDB Olinares, X Cao, ...
Proceedings of the National Academy of Sciences 118 (19), e2102516118, 2021
952021
Fidaxomicin jams Mycobacterium tuberculosis RNA polymerase motions needed for initiation via RbpA contacts
H Boyaci, J Chen, M Lilic, M Palka, RA Mooney, R Landick, SA Darst, ...
Elife 7, e34823, 2018
952018
Diverse and unified mechanisms of transcription initiation in bacteria
J Chen, H Boyaci, EA Campbell
Nature Reviews Microbiology 19 (2), 95-109, 2021
832021
6S RNA mimics B-form DNA to regulate Escherichia coli RNA polymerase
J Chen, KM Wassarman, S Feng, K Leon, A Feklistov, JT Winkelman, Z Li, ...
Molecular cell 68 (2), 388-397. e6, 2017
802017
CarD uses a minor groove wedge mechanism to stabilize the RNA polymerase open promoter complex
B Bae, J Chen, E Davis, K Leon, SA Darst, EA Campbell
Elife 4, e08505, 2015
762015
Mycobacterial RNA polymerase forms unstable open promoter complexes that are stabilized by CarD
E Davis, J Chen, K Leon, SA Darst, EA Campbell
Nucleic acids research 43 (1), 433-445, 2015
752015
E. coli TraR allosterically regulates transcription initiation by altering RNA polymerase conformation
J Chen, S Gopalkrishnan, C Chiu, AY Chen, EA Campbell, RL Gourse, ...
Elife 8, e49375, 2019
612019
Structural basis for transcription complex disruption by the Mfd translocase
JY Kang, E Llewellyn, J Chen, PDB Olinares, J Brewer, BT Chait, ...
Elife 10, e62117, 2021
422021
Ensemble cryo-EM reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication–transcription complex
J Chen, Q Wang, B Malone, E Llewellyn, Y Pechersky, K Maruthi, ET Eng, ...
Nature Structural & Molecular Biology 29 (3), 250-260, 2022
41*2022
The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase
M Lilic, J Chen, H Boyaci, N Braffman, E Hubin, J Herrmann, R Müller, ...
Proceedings of the National Academy of Sciences of the United States of America, 2020
302020
Structural origins of Escherichia coli RNA polymerase open promoter complex stability
RM Saecker, J Chen, CE Chiu, B Malone, J Sotiris, M Ebrahim, LY Yen, ...
Proceedings of the National Academy of Sciences 118 (40), e2112877118, 2021
282021
Structural basis for substrate selection by the SARS-CoV-2 replicase
BF Malone, JK Perry, PDB Olinares, HW Lee, J Chen, TC Appleby, ...
Nature 614 (7949), 781-787, 2023
262023
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