| A spatial genome aligner for resolving chromatin architectures from multiplexed DNA FISH BB Jia, A Jussila, C Kern, Q Zhu, B Ren Nature Biotechnology, 1-14, 2023 | 9 | 2023 |
| Single-cell analysis of chromatin accessibility in the adult mouse brain S Zu, YE Li, K Wang, EJ Armand, S Mamde, ML Amaral, Y Wang, A Chu, ... Nature 624 (7991), 378-389, 2023 | 7 | 2023 |
| Parallelized cytoindentation using convex micropatterned surfaces B Jia, TL Wee, CG Boudreau, DJ Berard, A Mallik, D Juncker, CM Brown, ... BioTechniques 61 (2), 73-82, 2016 | 7 | 2016 |
| Single-molecule microscopy using tunable nanoscale confinement CMJ McFaul, J Leith, B Jia, F Michaud, A Arsenault, A Martin, D Berard, ... Physical Chemistry of Interfaces and Nanomaterials XII 8811, 881102, 2013 | 3 | 2013 |
| SnapFISH: a computational pipeline to identify chromatin loops from multiplexed DNA FISH data L Lee, H Yu, BB Jia, A Jussila, C Zhu, J Chen, L Xie, A Hafner, S Mishra, ... Nature Communications 14 (1), 4873, 2023 | 2 | 2023 |
| Cell-type-specific 3D-genome organization and transcription regulation in the brain S Liu, P Zheng, CY Wang, BB Jia, NR Zemke, B Ren, X Zhuang bioRxiv, 2023.12. 04.570024, 2023 | 2 | 2023 |
| A spatial genome aligner for multiplexed DNA-FISH BB Jia, A Jussila, C Kern, Q Zhu, B Ren bioRxiv, 2022.03. 25.485845, 2022 | 2 | 2022 |
