CLARIFY: cell–cell interaction and gene regulatory network refinement from spatially resolved transcriptomics M Bafna, H Li, X Zhang Bioinformatics 39 (Supplement_1), i484-i493, 2023 | 7 | 2023 |
DeepViFi: detecting oncoviral infections in cancer genomes using transformers U Rajkumar, S Javadzadeh, M Bafna, D Wu, R Yu, J Shang, V Bafna Proceedings of the 13th ACM International Conference on Bioinformatics …, 2022 | 5 | 2022 |
DiffRNAFold: Generating RNA Tertiary Structures with Latent Space Diffusion M Bafna, V Keerthipati, SC Kanaparthi, R Zhang Deep Generative Models for Health Workshop NeurIPS 2023, 2023 | 1 | 2023 |
Benchmarking and Refining Cell-Cell Interactions with Spatial Transcriptomics and Deep Learning M Bafna, X Zhang St. Jude National Symposium for Undergraduate Research (Poster), 2022 | | 2022 |
Computer-implemented methods for quantitation of features of interest in whole slide imaging. NP Nguyen, L Mora-Blanco, K Turner, J Wiese, J Christiansen, M Bafna US Patent PCT/US2021/022,308, 2021 | | 2021 |