| Diverse alternative back-splicing and alternative splicing landscape of circular RNAs XO Zhang*, R Dong*, Y Zhang*, JL Zhang, Z Luo, J Zhang, LL Chen, ... Genome research 26 (9), 1277-1287, 2016 | 816 | 2016 |
| Giotto: a toolbox for integrative analysis and visualization of spatial expression data R Dries, Q Zhu, R Dong, CHL Eng, H Li, K Liu, Y Fu, T Zhao, A Sarkar, ... Genome biology 22, 1-31, 2021 | 435 | 2021 |
| SLERT regulates DDX21 rings associated with Pol I transcription YH Xing, RW Yao, Y Zhang, CJ Guo, S Jiang, G Xu, R Dong, L Yang, ... Cell 169 (4), 664-678. e16, 2017 | 222 | 2017 |
| CIRCpedia v2: an updated database for comprehensive circular RNA annotation and expression comparison R Dong*, XK Ma*, GW Li, L Yang Genomics, proteomics & bioinformatics 16 (4), 226-233, 2018 | 214 | 2018 |
| Increased complexity of circRNA expression during species evolution R Dong*, XK Ma*, LL Chen, L Yang RNA biology 14 (8), 1064-1074, 2017 | 198 | 2017 |
| SpatialDWLS: accurate deconvolution of spatial transcriptomic data R Dong, GC Yuan Genome biology 22 (1), 145, 2021 | 162 | 2021 |
| Accurate estimation of cell-type composition from gene expression data D Tsoucas, R Dong, H Chen, Q Zhu, G Guo, GC Yuan Nature communications 10 (1), 2975, 2019 | 152 | 2019 |
| CRISPR-Cas9-mediated genetic screening in mice with haploid embryonic stem cells carrying a guide RNA library C Zhong*, Q Yin*, Z Xie*, M Bai*, R Dong*, W Tang, YH Xing, H Zhang, ... Cell stem cell 17 (2), 221-232, 2015 | 120 | 2015 |
| CircRNA-derived pseudogenes R Dong, XO Zhang, Y Zhang, XK Ma, LL Chen, L Yang Cell research 26 (6), 747-750, 2016 | 113 | 2016 |
| A reference map of murine cardiac transcription factor chromatin occupancy identifies dynamic and conserved enhancers BN Akerberg, F Gu, NJ VanDusen, X Zhang, R Dong, K Li, B Zhang, ... Nature communications 10 (1), 4907, 2019 | 110 | 2019 |
| ADAR1 is required for differentiation and neural induction by regulating microRNA processing in a catalytically independent manner T Chen, JF Xiang, S Zhu, S Chen, QF Yin, XO Zhang, J Zhang, H Feng, ... Cell Research 25 (4), 459-476, 2015 | 92 | 2015 |
| CIRCexplorer3: a CLEAR pipeline for direct comparison of circular and linear RNA expression XK Ma, MR Wang, CX Liu, R Dong, GG Carmichael, LL Chen, L Yang Genomics, Proteomics and Bioinformatics 17 (5), 511-521, 2019 | 60 | 2019 |
| Parthenogenetic haploid embryonic stem cells efficiently support mouse generation by oocyte injection C Zhong, Z Xie, Q Yin, R Dong, S Yang, Y Wu, L Yang, J Li Cell research 26 (1), 131-134, 2016 | 57 | 2016 |
| GiniClust3: a fast and memory-efficient tool for rare cell type identification R Dong, GC Yuan BMC bioinformatics 21, 1-7, 2020 | 31 | 2020 |
| Genome-wide annotation of circRNAs and their alternative back-splicing/splicing with CIRCexplorer pipeline R Dong, XK Ma, LL Chen, L Yang Epitranscriptomics: Methods and Protocols, 137-149, 2019 | 24 | 2019 |
| EWSR1-ATF1 dependent 3D connectivity regulates oncogenic and differentiation programs in Clear Cell Sarcoma E Möller, V Praz, S Rajendran, R Dong, A Cauderay, YH Xing, L Lee, ... Nature Communications 13 (1), 2267, 2022 | 22 | 2022 |
| Condensates induced by transcription inhibition localize active chromatin to nucleoli T Yasuhara, YH Xing, NC Bauer, L Lee, R Dong, T Yadav, RJ Soberman, ... Molecular cell 82 (15), 2738-2753. e6, 2022 | 21 | 2022 |
| Highly connected 3D chromatin networks established by an oncogenic fusion protein shape tumor cell identity R Sanalkumar*, R Dong*, L Lee, YH Xing, S Iyer, I Letovanec, S La Rosa, ... Science Advances 9 (13), eabo3789, 2023 | 7 | 2023 |
| DisP-seq reveals the genome-wide functional organization of DNA-associated disordered proteins YH Xing*, R Dong*, L Lee, S Rengarajan, N Riggi, G Boulay, MN Rivera Nature Biotechnology, 1-13, 2023 | 4 | 2023 |
Li YangFudan UniversityVerified email at fudan.edu.cn
