| Extrachromosomal DNA formation enables tumor immune escape potentially through regulating antigen presentation gene expression T Wu, C Wu, X Zhao, G Wang, W Ning, Z Tao, F Chen, XS Liu Scientific reports 12 (1), 3590, 2022 | 15 | 2022 |
| Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction K Diao, J Chen, T Wu, X Wang, G Wang, X Sun, X Zhao, C Wu, J Wang, ... International Journal of Molecular Sciences 23 (19), 11624, 2022 | 13 | 2022 |
| Oncogenic EFNA4 amplification promotes lung adenocarcinoma lymph node metastasis X Zhao, Y Chen, X Sun, Z He, T Wu, C Wu, J Chen, J Wang, K Diao, ... Cancers 14 (17), 4226, 2022 | 7 | 2022 |
| Quantification of neoantigen-mediated immunoediting in cancer evolution T Wu, G Wang, X Wang, S Wang, X Zhao, C Wu, W Ning, Z Tao, F Chen, ... Cancer Research 82 (12), 2226-2238, 2022 | 7 | 2022 |
| The repertoire of copy number alteration signatures in human cancer Z Tao, S Wang, C Wu, T Wu, X Zhao, W Ning, G Wang, J Wang, J Chen, ... Briefings in Bioinformatics 24 (2), bbad053, 2023 | 6 | 2023 |
| TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning G Wang, T Wu, W Ning, K Diao, X Sun, J Wang, C Wu, J Chen, D Xu, ... Briefings in Bioinformatics 24 (3), bbad116, 2023 | 3 | 2023 |
| Accurate prediction of pan-cancer types using machine learning with minimal number of DNA methylation sites W Ning, T Wu, C Wu, S Wang, Z Tao, G Wang, X Zhao, K Diao, J Wang, ... Journal of Molecular Cell Biology 15 (4), mjad023, 2023 | 1 | 2023 |
| Copy number alteration features in pan-cancer homologous recombination deficiency prediction and biology H Yao, H Li, J Wang, T Wu, W Ning, K Diao, C Wu, G Wang, Z Tao, X Zhao, ... Communications Biology 6 (1), 527, 2023 | | 2023 |
| Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution T Wu, G Wang, X Wang, S Wang, X Zhao, C Wu, W Ning, Z Tao, F Chen, ... bioRxiv, 2022.04. 08.487711, 2022 | | 2022 |
| Extrachromosomal DNA is associated with decreased immune cell infiltration and antigen presentation, represents a potential cancer immune evasion mechanism T Wu, C Wu, X Zhao, G Wang, W Ning, Z Tao, F Chen, XS Liu bioRxiv, 2022.02. 04.479205, 2022 | | 2022 |
