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Shuyu Zheng
Shuyu Zheng
University of Helsink
Verified email at helsinki.fi
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SynergyFinder plus: toward better interpretation and annotation of drug combination screening datasets
S Zheng, W Wang, J Aldahdooh, A Malyutina, T Shadbahr, Z Tanoli, ...
Genomics, Proteomics and Bioinformatics 20 (3), 587-596, 2022
2122022
DrugComb: an integrative cancer drug combination data portal
B Zagidullin, J Aldahdooh, S Zheng, W Wang, Y Wang, J Saad, ...
Nucleic acids research 47 (W1), W43-W51, 2019
1692019
Chloroplot: an online program for the versatile plotting of organelle genomes
S Zheng, P Poczai, J Hyvönen, J Tang, A Amiryousefi
Frontiers in genetics 11, 576124, 2020
1602020
Drug synergy of combinatory treatment with remdesivir and the repurposed drugs fluoxetine and itraconazole effectively impairs SARS‐CoV‐2 infection in vitro
S Schloer, L Brunotte, A Mecate‐Zambrano, S Zheng, J Tang, S Ludwig, ...
British Journal of Pharmacology 178 (11), 2339-2350, 2021
902021
DrugComb update: a more comprehensive drug sensitivity data repository and analysis portal
S Zheng, J Aldahdooh, T Shadbahr, Y Wang, D Aldahdooh, J Bao, ...
Nucleic acids research 49 (W1), W174-W184, 2021
702021
Anticancer drug synergy prediction in understudied tissues using transfer learning
Y Kim, S Zheng, J Tang, W Jim Zheng, Z Li, X Jiang
Journal of the American Medical Informatics Association 28 (1), 42-51, 2021
632021
A community challenge for a pancancer drug mechanism of action inference from perturbational profile data
EF Douglass, RJ Allaway, B Szalai, W Wang, T Tian, A Fernández-Torras, ...
Cell Reports Medicine 3 (1), 2022
392022
PTENP1 inhibits the growth of esophageal squamous cell carcinoma by regulating SOCS6 expression and correlates with disease prognosis
T Gong, S Zheng, S Huang, S Fu, X Zhang, S Pan, T Yang, Y Sun, ...
Molecular carcinogenesis 56 (12), 2610-2619, 2017
392017
Combination Therapy with Fluoxetine and the Nucleoside Analog GS-441524 Exerts Synergistic Antiviral Effects against Different SARS-CoV-2 Variants In Vitro
L Brunotte, S Zheng, A Mecate-Zambrano, J Tang, S Ludwig, U Rescher, ...
Pharmaceutics 13 (9), 1400, 2021
382021
Comparative analysis of gene expression profiles of hip articular cartilage between non-traumatic necrosis and osteoarthritis
W Wang, Y Liu, J Hao, S Zheng, Y Wen, X Xiao, A He, Q Fan, F Zhang, ...
Gene 591 (1), 43-47, 2016
292016
High mobility group box 1 promotes radioresistance in esophageal squamous cell carcinoma cell lines by modulating autophagy
H Ma, S Zheng, X Zhang, T Gong, X Lv, S Fu, S Zhang, X Yin, J Hao, ...
Cell Death & Disease 10 (2), 136, 2019
272019
Effect of sinomenine hydrochloride on radiosensitivity of esophageal squamous cell carcinoma cells
S Fu, L Jin, T Gong, S Pan, S Zheng, X Zhang, T Yang, Y Sun, Y Wang, ...
Oncology reports 39 (4), 1601-1608, 2018
242018
Bipartite network models to design combination therapies in acute myeloid leukaemia
M Jafari, M Mirzaie, J Bao, F Barneh, S Zheng, J Eriksson, CA Heckman, ...
Nature Communications 13 (1), 2128, 2022
182022
Chloroplot: an online program for the versatile plotting of organelle genomes. Front Genet 11: 576124
S Zheng, P Poczai, J Hyvönen, J Tang, A Amiryousefi
162020
Association between cartilage intermediate layer protein and degeneration of intervertebral disc: A Meta-analysis
W Wang, J Hao, S Zheng, X Xiao, Y Wen, A He, X Guo, F Zhang
Spine 41 (20), E1244-E1248, 2016
162016
Network-guided identification of cancer-selective combinatorial therapies in ovarian cancer
L He, D Bulanova, J Oikkonen, A Häkkinen, K Zhang, S Zheng, W Wang, ...
Briefings in bioinformatics 22 (6), bbab272, 2021
152021
Survival benefit evaluation of radiotherapy in esophageal cancer patients aged 80 and older
S Huang, S Zheng, T Gong, H Ma, Y Ke, S Zhao, W Wang, L Jia, X Zhang
Oncotarget 8 (67), 112094, 2017
112017
Tissue-specific pathway association analysis using genome-wide association study summaries
W Wang, J Hao, S Zheng, Q Fan, A He, Y Wen, X Guo, C Wu, S Wang, ...
Bioinformatics 33 (2), 243-247, 2017
102017
Endothelial TIE1 restricts angiogenic sprouting to coordinate vein assembly in synergy with its homologue TIE2
X Cao, T Li, B Xu, K Ding, W Li, B Shen, M Chu, D Zhu, L Rui, Z Shang, ...
Arteriosclerosis, Thrombosis, and Vascular Biology, 2023
32023
Vascular adhesion protein-1 defines a unique subpopulation of human hematopoietic stem cells and regulates their proliferation
I Iftakhar-e-Khuda, A Pessia, S Zheng, M Kankainen, M Kontro, ...
Cellular and Molecular Life Sciences 78, 7851-7872, 2021
22021
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