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Jonas Simon Fleck
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Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ...
Nature medicine 25 (4), 679-689, 2019
8472019
Organoid single-cell genomic atlas uncovers human-specific features of brain development
S Kanton, MJ Boyle, Z He, M Santel, A Weigert, F Sanchís-Calleja, ...
Nature 574 (7778), 418-422, 2019
5542019
Inferring and perturbing cell fate regulomes in human brain organoids
JS Fleck, SMJ Jansen, D Wollny, F Zenk, M Seimiya, A Jain, R Okamoto, ...
Nature 621 (7978), 365-372, 2023
1152023
Resolving organoid brain region identities by mapping single-cell genomic data to reference atlases
JS Fleck, F Sanchís-Calleja, Z He, M Santel, MJ Boyle, JG Camp, ...
Cell stem cell 28 (6), 1148-1159. e8, 2021
622021
Single-cell analyses of axolotl telencephalon organization, neurogenesis, and regeneration
K Lust, A Maynard, T Gomes, JS Fleck, JG Camp, EM Tanaka, B Treutlein
Science 377 (6610), eabp9262, 2022
422022
Single-cell brain organoid screening identifies developmental defects in autism
C Li, JS Fleck, C Martins-Costa, TR Burkard, J Themann, M Stuempflen, ...
Nature 621 (7978), 373-380, 2023
402023
Multimodal spatiotemporal phenotyping of human retinal organoid development
P Wahle, G Brancati, C Harmel, Z He, G Gut, JS Del Castillo, ...
Nature Biotechnology 41 (12), 1765-1775, 2023
292023
Accurate de novo identification of biosynthetic gene clusters with GECCO
LM Carroll, M Larralde, JS Fleck, R Ponnudurai, A Milanese, E Cappio, ...
BioRxiv, 2021.05. 03.442509, 2021
242021
What is a cell type?
JS Fleck, JG Camp, B Treutlein
Science 381 (6659), 733-734, 2023
102023
Resolving brain organoid heterogeneity by mapping single cell genomic data to a spatial reference
JS Fleck, Z He, MJ Boyle, JG Camp, B Treutlein
bioRxiv, 2020.01. 06.896282, 2020
72020
Caprin-1 binding to the critical stress granule protein G3BP1 is regulated by pH
T Schulte, MD Panas, L Williams, N Kedersha, JS Fleck, TJC Tan, ...
bioRxiv, 2021.02. 05.429362, 2021
62021
Single-cell analyses of axolotl forebrain organization, neurogenesis, and regeneration
K Lust, A Maynard, T Gomes, JS Fleck, JG Camp, EM Tanaka, B Treutlein
BioRxiv, 2022.03. 21.485045, 2022
52022
An integrated transcriptomic cell atlas of human neural organoids
Z He, L Dony, JS Fleck, A Szalata, KX Li, I Sliskovic, HC Lin, M Santel, ...
bioRxiv, 2023.10. 05.561097, 2023
42023
Caprin-1 binding to the critical stress granule protein G3BP1 is influenced by pH
T Schulte, MD Panas, X Han, L Williams, N Kedersha, JS Fleck, TJC Tan, ...
Open Biology 13 (5), 220369, 2023
22023
An integrated transcriptomic cell atlas of human endoderm-derived organoids
Q Xu, L Halle, S Hediyeh-zadeh, M Kuijs, U Kilik, Q Yu, T Frum, L Adam, ...
bioRxiv, 2023.11. 20.567825, 2023
12023
Author Correction: Single-cell brain organoid screening identifies developmental defects in autism
C Li, JS Fleck, C Martins-Costa, TR Burkard, J Themann, M Stuempflen, ...
Nature 623 (7989), E20, 2023
12023
Single-cell epigenomic reconstruction of developmental trajectories in human neural organoid systems from pluripotency
F Zenk, JS Fleck, SMJ Jansen, B Kashanian, B Eisinger, M Santel, ...
bioRxiv, 2023.09. 12.557341, 2023
12023
Decoding morphogen patterning of human neural organoids with a multiplexed single-cell transcriptomic screen
F Sanchis-Calleja, A Jain, Z He, R Okamoto, C Rusimbi, P Rifes, ...
bioRxiv, 2024.02. 08.579413, 2024
2024
Exploring brain development in organoids with single-cell multi-omics
JS Fleck
ETH Zurich, 2022
2022
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Articles 1–19