Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities S Müller-Dott, E Tsirvouli, M Vazquez, RO Ramirez Flores, ... Nucleic Acids Research 51 (20), 10934-10949, 2023 | 20 | 2023 |
Microemulsions as potential carriers of nisin: Effect of composition on structure and efficacy MD Chatzidaki, K Papadimitriou, V Alexandraki, E Tsirvouli, Z Chakim, ... Langmuir 32 (35), 8988-8998, 2016 | 16 | 2016 |
A Middle-Out Modeling Strategy to Extend a Colon Cancer Logical Model Improves Drug Synergy Predictions in Epithelial-Derived Cancer Cell Lines E Tsirvouli, V Touré, B Niederdorfer, M Vázquez, Å Flobak, M Kuiper Frontiers Molecular Biosciences, 2020 | 13 | 2020 |
Logical and experimental modeling of cytokine and eicosanoid signaling in psoriatic keratinocytes E Tsirvouli, F Ashcroft, B Johansen, M Kuiper Iscience 24 (12), 2021 | 5 | 2021 |
Functional studies of CpSRP54 in diatoms show that the mechanism of thylakoid protein insertion differs from that in plants and green algae M Nymark, MC Grønbech Hafskjold, C Volpe, DM Fonseca, A Sharma, ... The Plant Journal 106 (1), 113-132, 2021 | 5 | 2021 |
Characterisation of Colorectal Cancer Cell Lines through Proteomic Profiling of Their Extracellular Vesicles KA Heck, HT Lindholm, B Niederdorfer, E Tsirvouli, M Kuiper, Å Flobak, ... Proteomes 11 (1), 3, 2023 | 4 | 2023 |
Patient-specific logical models replicate phenotype responses to psoriatic and anti-psoriatic stimuli. E Tsirvouli, E Aker, M Kuiper bioRxiv, 2023.08. 24.554583, 2023 | 2 | 2023 |
Halogenated boroxine increases propensity to apoptosis in leukemia (UT‐7) but not non‐tumor cells in vitro M Hadzic, Y Sun, N Tomic, E Tsirvouli, M Kuiper, L Pojskic FEBS Open Bio 13 (1), 143-153, 2023 | 2 | 2023 |
A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ... bioRxiv, 2022.12. 17.520865, 2022 | 1 | 2022 |
Dynamic Boolean modeling of molecular and cellular interactions in psoriasis predicts drug target candidates E Tsirvouli, V Noël, Å Flobak, L Calzone, M Kuiper Iscience 27 (2), 2024 | | 2024 |
Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches A Niarakis, M Ostaszewski, A Mazein, M Kutmon, ME Gillespie, ... Frontiers in Immunology 14, 1282859, 2024 | | 2024 |
Deciphering molecular mechanisms of synergistic growth reduction in kinase inhibitor combinations E Tsirvouli, A Martinez del Val, L Thommesen, A Laegreid, M Kuiper, ... bioRxiv, 2024.03. 12.584561, 2024 | | 2024 |
A dynamic Boolean model of molecular and cellular interactions represents psoriasis development and predicts drug candidates. E Tsirvouli, V Noël, Å Flobak, L Calzone, M Kuiper bioRxiv, 2023.09. 03.556147, 2023 | | 2023 |
A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms (preprint) A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, ME Gillespie, ... | | 2022 |
Signaling Pathway Modules: network organization elements for understanding cancer and designing therapies. E Tsirvouli NTNU, 2019 | | 2019 |