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Eirini Tsirvouli
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Year
Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities
S Müller-Dott, E Tsirvouli, M Vazquez, RO Ramirez Flores, ...
Nucleic Acids Research 51 (20), 10934-10949, 2023
202023
Microemulsions as potential carriers of nisin: Effect of composition on structure and efficacy
MD Chatzidaki, K Papadimitriou, V Alexandraki, E Tsirvouli, Z Chakim, ...
Langmuir 32 (35), 8988-8998, 2016
162016
A Middle-Out Modeling Strategy to Extend a Colon Cancer Logical Model Improves Drug Synergy Predictions in Epithelial-Derived Cancer Cell Lines
E Tsirvouli, V Touré, B Niederdorfer, M Vázquez, Å Flobak, M Kuiper
Frontiers Molecular Biosciences, 2020
132020
Logical and experimental modeling of cytokine and eicosanoid signaling in psoriatic keratinocytes
E Tsirvouli, F Ashcroft, B Johansen, M Kuiper
Iscience 24 (12), 2021
52021
Functional studies of CpSRP54 in diatoms show that the mechanism of thylakoid protein insertion differs from that in plants and green algae
M Nymark, MC Grønbech Hafskjold, C Volpe, DM Fonseca, A Sharma, ...
The Plant Journal 106 (1), 113-132, 2021
52021
Characterisation of Colorectal Cancer Cell Lines through Proteomic Profiling of Their Extracellular Vesicles
KA Heck, HT Lindholm, B Niederdorfer, E Tsirvouli, M Kuiper, Å Flobak, ...
Proteomes 11 (1), 3, 2023
42023
Patient-specific logical models replicate phenotype responses to psoriatic and anti-psoriatic stimuli.
E Tsirvouli, E Aker, M Kuiper
bioRxiv, 2023.08. 24.554583, 2023
22023
Halogenated boroxine increases propensity to apoptosis in leukemia (UT‐7) but not non‐tumor cells in vitro
M Hadzic, Y Sun, N Tomic, E Tsirvouli, M Kuiper, L Pojskic
FEBS Open Bio 13 (1), 143-153, 2023
22023
A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms
A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ...
bioRxiv, 2022.12. 17.520865, 2022
12022
Dynamic Boolean modeling of molecular and cellular interactions in psoriasis predicts drug target candidates
E Tsirvouli, V Noël, Å Flobak, L Calzone, M Kuiper
Iscience 27 (2), 2024
2024
Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches
A Niarakis, M Ostaszewski, A Mazein, M Kutmon, ME Gillespie, ...
Frontiers in Immunology 14, 1282859, 2024
2024
Deciphering molecular mechanisms of synergistic growth reduction in kinase inhibitor combinations
E Tsirvouli, A Martinez del Val, L Thommesen, A Laegreid, M Kuiper, ...
bioRxiv, 2024.03. 12.584561, 2024
2024
A dynamic Boolean model of molecular and cellular interactions represents psoriasis development and predicts drug candidates.
E Tsirvouli, V Noël, Å Flobak, L Calzone, M Kuiper
bioRxiv, 2023.09. 03.556147, 2023
2023
A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms (preprint)
A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, ME Gillespie, ...
2022
Signaling Pathway Modules: network organization elements for understanding cancer and designing therapies.
E Tsirvouli
NTNU, 2019
2019
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Articles 1–15