Andrzej Kloczkowski

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Andrzej KolinskiProfessor, University of WarsawVerified email at chem.uw.edu.pl
Taner SenResearch Scientist, USDA-ARS, GrainGenes / Adj. Prof., UC BerkeleyVerified email at usda.gov
Ivet BaharDirector, Laufer Center for Physical & Quantitative Biology, Stony Brook UniversityVerified email at pitt.edu
Eshel FaraggiAdjunct Professor, Physics, IUPUI; President, Research and Information Systems; Consultant, BattelleVerified email at iupui.edu
Juan Luis Fernández-MartínezFull Professor in Applied Maths. University of Oviedo (Spain)Verified email at uniovi.es
Maksim KouzaFaculty of Chemistry, University of WarsawVerified email at chem.uw.edu.pl
Saras SaraswathiConsultantVerified email at sidra.org
Irina A. BuhimschiUniversity of Illinois at ChicagoVerified email at uic.edu
Paweł GniewekRezo TherapeuticsVerified email at rezotx.com
Anirban BanerjiBattelle Center for Mathematical Medicine, Nationwide Children's Hospital, Columbus, OHVerified email at nationwidechildrens.org
anton apostolovVerified email at chem.uni-sofia.bg
Stoyko FakirovProfessor of Polymer Science, The Auckland UniversityVerified email at auckland.ac.nz
Yaoqi ZhouSenior Principal Investigator, Institute of Systems & Physical Biology, Shenzhen Bay LaboratoryVerified email at szbl.ac.cn
Aris SklirosFinance professionalVerified email at mfe.berkeley.edu
Marcin PawlowskiRowAnalyticsVerified email at nationwidechildrens.org
Drena DobbsUniversity Professor, Emerita, Genetics, Development & Cell Biology, Iowa State UniversityVerified email at iastate.edu
Ataur KatebiBaylor College of MedicineVerified email at northeastern.edu
Suresh SundaramProfessor, Department of Aerospace Engineering, Indian Institute of ScienceVerified email at iisc.ac.in
Vasant G HonavarDorothy Foehr Huck and J. Lloyd Huck Chair in Biomedical Data Sciences and Artificial IntelligenceVerified email at psu.edu
Lei YangResearch Scientist - Data Scientist, DuPont PioneerVerified email at ustc.edu

Andrzej Kloczkowski

Professor of Pediatrics, The Ohio State University, Institute for Genomic Medicine, NCH

Verified email at osu.edu

bioinformatics computational biology biomedical datamining protein structure prediction medical informatics


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GOR V server for protein secondary structure prediction TZ Sen, RL Jernigan, J Garnier, A Kloczkowski Bioinformatics 21 (11), 2787-2788, 2005	259	2005
Combining the GOR V algorithm with evolutionary information for protein secondary structure prediction from amino acid sequence A Kloczkowski, KL Ting, RL Jernigan, J Garnier Proteins: Structure, Function, and Bioinformatics 49 (2), 154-166, 2002	209	2002
Innovations in genomics and big data analytics for personalized medicine and health care: A review M Hassan, FM Awan, A Naz, EJ deAndrés-Galiana, O Alvarez, A Cernea, ... International journal of molecular Sciences 23 (9), 4645, 2022	161	2022
Mechanical properties and transition temperatures of crosslinked-oriented gelatin: II. Effect of orientation and water content on transition temperatures S Fakirov, Z Sarac, T Anbar, B Boz, I Bahar, M Evstatiev, AA Apostolov, ... Colloid and Polymer Science 275, 307-314, 1997	114*	1997
Chain dimensions and fluctuations in random elastomeric networks. 1. Phantom Gaussian networks in the undeformed state A Kloczkowski, JE Mark, B Erman Macromolecules 22 (3), 1423-1432, 1989	96	1989
Four‐body contact potentials derived from two protein datasets to discriminate native structures from decoys Y Feng, A Kloczkowski, RL Jernigan Proteins: Structure, Function, and Bioinformatics 68 (1), 57-66, 2007	94	2007
The extent of cooperativity of protein motions observed with elastic network models is similar for atomic and coarser-grained models TZ Sen, Y Feng, JV Garcia, A Kloczkowski, RL Jernigan Journal of chemical theory and computation 2 (3), 696-704, 2006	88	2006
Inferring ideal amino acid interaction forms from statistical protein contact potentials P Pokarowski, A Kloczkowski, RL Jernigan, NS Kothari, M Pokarowska, ... Proteins: Structure, Function, and Bioinformatics 59 (1), 49-57, 2005	87	2005
Simulations on the reinforcement of poly (dimethylsiloxane) elastomers by randomly distributed filler particles QW Yuan, A Kloczkowski, JE Mark, MA Sharaf Journal of Polymer Science Part B: Polymer Physics 34 (9), 1647-1657, 1996	85	1996
A diffused-constraint theory for the elasticity of amorphous polymer networks. 1. Fundamentals and stress-strain isotherms in elongation A Kloczkowski, JE Mark, B Erman Macromolecules 28 (14), 5089-5096, 1995	84	1995
The relaxation spectrum for Gaussian networks A Kloczkowski, JE Mark, HL Frisch Macromolecules 23 (14), 3481-3490, 1990	83	1990
Protein folds vs. protein folding: Differing questions, different challenges SJ Chen, M Hassan, RL Jernigan, K Jia, D Kihara, A Kloczkowski, ... Proceedings of the National Academy of Sciences 120 (1), e2214423119, 2023	77	2023
The ribosome structure controls and directs mRNA entry, translocation and exit dynamics O Kurkcuoglu, P Doruker, TZ Sen, A Kloczkowski, RL Jernigan Physical biology 5 (4), 046005, 2008	77	2008
Some simulations on filler reinforcement in elastomers JE Mark, R Abou-Hussein, TZ Sen, A Kloczkowski Polymer 46 (21), 8894-8904, 2005	72	2005
The GOR method of protein secondary structure prediction and its application as a protein aggregation prediction tool M Kouza, E Faraggi, A Kolinski, A Kloczkowski Prediction of protein secondary structure, 7-24, 2017	69	2017
Functional clustering of yeast proteins from the protein-protein interaction network TZ Sen, A Kloczkowski, RL Jernigan BMC bioinformatics 7, 1-13, 2006	66	2006
Lattice model for segmental orientation in deformed polymeric networks. 1. Contribution of intermolecular correlations B Erman, I Bahar, A Kloczkowski, JE Mark Macromolecules 23 (26), 5335-5340, 1990	63	1990
Accurate single‐sequence prediction of solvent accessible surface area using local and global features E Faraggi, Y Zhou, A Kloczkowski Proteins: Structure, Function, and Bioinformatics 82 (11), 3170-3176, 2014	62	2014
Modeling of protein structural flexibility and large-scale dynamics: Coarse-grained simulations and elastic network models S Kmiecik, M Kouza, AE Badaczewska-Dawid, A Kloczkowski, A Kolinski International journal of molecular sciences 19 (11), 3496, 2018	61	2018
DescribePROT: database of amino acid-level protein structure and function predictions B Zhao, A Katuwawala, CJ Oldfield, AK Dunker, E Faraggi, J Gsponer, ... Nucleic Acids Research 49 (D1), D298-D308, 2021	59	2021

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